RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 MFSD9Q8NBP5 474 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 UBTD2Q8WUN7 234 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 EXT2Q93063 718 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 MTBPQ96DY7 904 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 TM4SF19Q96DZ7 209 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 MVB12AQ96EY5 273 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 TSNARE1Q96NA8 513 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 VPS11Q9H270 941 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 SPNS1Q9H2V7 528 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 WDR54Q9H977 334 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 GPRC5BQ9NZH0 403 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 CD274Q9NZQ7 290 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 B3GNT3Q9Y2A9 372 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 KCNE2Q9Y6J6 123 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 RELNP78509 3460 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 SYCE1LA8MT33 242 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 AGPSO00116 658 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 KLK8O60259 260 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 CNOT3O75175 753 aaKnown RBP12.13□□□□□ -0.47
CCDC57-211ENST00000578187 S100BP04271 92 aaPredicted RBP12.13□□□□□ -0.47
CCDC57-211ENST00000578187 COL6A2P12110 1019 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 GNAZP19086 355 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 ITGA3P26006 1051 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 SCTRP47872 440 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 GLRBP48167 497 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 HSPA7P48741 367 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 MEF2AQ02078 507 aaPredicted RBP12.13□□□□□ -0.47
CCDC57-211ENST00000578187 CDC16Q13042 620 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 ELOAQ14241 798 aaKnown RBP12.13□□□□□ -0.47
CCDC57-211ENST00000578187 LGSNQ5TDP6 509 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 PRMT9Q6P2P2 845 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 KLC3Q6P597 504 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 NXPE4Q6UWF7 544 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 SLCO4C1Q6ZQN7 724 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 LRRC70Q7Z2Q7 622 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 DTWD1Q8N5C7 304 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 UBLCP1Q8WVY7 318 aaPredicted RBP12.13□□□□□ -0.47
CCDC57-211ENST00000578187 CABS1Q96KC9 395 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 SLC26A1Q9H2B4 701 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 DNAJC11Q9NVH1 559 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
CCDC57-211ENST00000578187 ASB1Q9Y576 335 aa12.13□□□□□ -0.47
CCDC57-211ENST00000578187 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 SUPT3HB4E1H0 165 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 LCMT2O60294 686 aaKnown RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 SUPT3HO75486 399 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 STK16O75716 305 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 MMP11P24347 488 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 FAM53BQ14153 422 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 PDK4Q16654 411 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 FBXO48Q5FWF7 155 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ATG9BQ674R7 924 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 TMEM214Q6NUQ4 689 aaKnown RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ASPGQ86U10 573 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 TBC1D19Q8N5T2 526 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 METTL27Q8N6F8 245 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 RBMXL3Q8N7X1 1067 aaKnown RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 CAMKVQ8NCB2 501 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ZNF740Q8NDX6 193 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 AENQ8WTP8 325 aaKnown RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 SSC4DQ8WTU2 575 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ESAMQ96AP7 390 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 WDR34Q96EX3 536 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 PSMG3-AS1Q96PY0 264 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 AIF1LQ9BQI0 150 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 CD244Q9BZW8 370 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 EHD1Q9H4M9 534 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 PPCSQ9HAB8 311 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ZNF304Q9HCX3 659 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 ZNF358Q9NW07 568 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 COPG2Q9UBF2 871 aa12.12□□□□□ -0.47
CCDC57-211ENST00000578187 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 V9GYY5 206 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-211ENST00000578187 SCN3AQ9NY46 2000 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 IQANK1A0A1B0GTG1 560 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 VSTM2BA6NLU5 285 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 MAP2K7O14733 419 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 FOXS1O43638 330 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 OR1F1O43749 312 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 PRAMEF4O60810 478 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 STATHP02808 62 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 SHBGP04278 402 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 UMODP07911 640 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 SLC35G6P0C7Q6 338 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 C1GALT1C1LP0DN25 315 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 EPORP19235 508 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 AHRP35869 848 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 OR1D4P47884 311 aa12.11□□□□□ -0.47
CCDC57-211ENST00000578187 AGTR2P50052 363 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms