RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 GATAD1Q8WUU5 269 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 PIK3R3Q92569 461 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 LINC00479Q96M42 142 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 RUNDC3BQ96NL0 473 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 LITAFQ99732 161 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 C17orf62Q9BQA9 187 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 WWTR1Q9GZV5 400 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 HOXD1Q9GZZ0 328 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 RIMS4Q9H426 269 aaPredicted RBP2.23□□□□□ -2.05
COPS3-213ENST00000577210 TMEM206Q9H813 350 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 VIPAS39Q9H9C1 493 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 TUFT1Q9NNX1 390 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 MID1IP1Q9NPA3 183 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 MAN2C1Q9NTJ4 1040 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 TBC1D13Q9NVG8 400 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 CNIH4Q9P003 139 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 GMEB2Q9UKD1 530 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 LIPT1Q9Y234 373 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 EXOGQ9Y2C4 368 aaKnown RBP2.23□□□□□ -2.05
COPS3-213ENST00000577210 DISP3Q9P2K9 1392 aa2.23□□□□□ -2.05
COPS3-213ENST00000577210 TAF1P21675 1872 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ACEP12821 1306 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 A0A087WUV0 522 aaPredicted RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 C13orf42A0A1B0GVH6 325 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 SELENOFO60613 162 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 CYTIPO60759 359 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 MTRF1O75570 445 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 B3GALNT1O75752 331 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ATP1B1P05026 303 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 SERPING1P05155 500 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 CD48P09326 243 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 DARSP14868 501 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 GAP43P17677 238 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ITIH1P19827 911 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 SERPINB6P35237 376 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 DCDC1P59894 354 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 STX1BP61266 288 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ERVK-16P61578 105 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ST8SIA6P61647 398 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ARHGAP1Q07960 439 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 SQLEQ14534 574 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 SMC1AQ14683 1233 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 LASP1Q14847 261 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 MORF4L2Q15014 288 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 MRGPRG-AS1Q2M3A8 158 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 KRTAP24-1Q3LI83 254 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 LBHQ53QV2 105 aaPredicted RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 LRRC38Q5VT99 294 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 TATDN1Q6P1N9 297 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 CYB5D1Q6P9G0 228 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 CNSTQ6PJW8 725 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ISLR2Q6UXK2 745 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 LEKR1Q6ZMV7 388 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 C15orf52Q6ZUT6 534 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 BTN2A1Q7KYR7 527 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 PEX5LQ8IYB4 626 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 CLYBLQ8N0X4 340 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 TMEM99Q8N816 258 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 NUP37Q8NFH4 326 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 KBTBD8Q8NFY9 601 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 APOBEC4Q8WW27 367 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 RIT1Q92963 219 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 TEKT1Q969V4 418 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ART5Q96L15 291 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 PRAM1Q96QH2 718 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 IDI2Q9BXS1 227 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 CACNG6Q9BXT2 260 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 FGFBP2Q9BYJ0 223 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 LSG1Q9H089 658 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 THAP2Q9H0W7 228 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 NAPBQ9H115 298 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ATP13A3Q9H7F0 1226 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 LMAN1LQ9HAT1 526 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 IL1RAPL2Q9NP60 686 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 GPR173Q9NS66 373 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 IARS2Q9NSE4 1012 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 PANK4Q9NVE7 773 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 RNF186Q9NXI6 227 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 KLHL8Q9P2G9 620 aaPredicted RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 LNPEPQ9UIQ6 1025 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 ERRFI1Q9UJM3 462 aaPredicted RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 FBXL5Q9UKA1 691 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 PPP1R3CQ9UQK1 317 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 MRPS28Q9Y2Q9 187 aaKnown RBP2.22□□□□□ -2.05
COPS3-213ENST00000577210 PRSS21Q9Y6M0 314 aa2.22□□□□□ -2.05
COPS3-213ENST00000577210 LOC105371242A0A075B767 164 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 A0A0A6YYC8 382 aaPredicted RBP2.21□□□□□ -2.06
COPS3-213ENST00000577210 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 KRT87PA6NCN2 255 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 I3L1I5 382 aaPredicted RBP2.21□□□□□ -2.06
COPS3-213ENST00000577210 SURF4O15260 269 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 DCXO43602 365 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 PRAF2O60831 178 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 CLN5O75503 358 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 STAM2O75886 525 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 AKAP3O75969 853 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 PNPP00491 289 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 SLC4A1P02730 911 aa2.21□□□□□ -2.06
COPS3-213ENST00000577210 ANKRD34CP0C6C1 535 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms