RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 N4BP2L2Q92802 583 aaPredicted RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 ALKBH8Q96BT7 664 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 C8orf44Q96CB5 159 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 MRRFQ96E11 262 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 CABS1Q96KC9 395 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 HIST1H2AHQ96KK5 128 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 QRFPRQ96P65 431 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 SMAD5Q99717 465 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 HIST1H2AJQ99878 128 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 H2AFJQ9BTM1 129 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 ZNF717Q9BY31 904 aaPredicted RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 VN1R1Q9GZP7 353 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 EPN3Q9H201 632 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 ZBTB20Q9HC78 741 aaPredicted RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 ZBTB26Q9HCK0 441 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 GPRC5BQ9NZH0 403 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 FETUBQ9UGM5 382 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 NDOR1Q9UHB4 597 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 ZFP69BQ9UJL9 534 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 FBXL4Q9UKA2 621 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 NXT1Q9UKK6 140 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 EMCNQ9ULC0 261 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 PADI2Q9Y2J8 665 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 CNTRLQ7Z7A1 2325 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 SPTAN1Q13813 2472 aaKnown RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 A0A087WUV0 522 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 A0A087X1B8 175 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 IGKV3D-11A0A0A0MRZ8 115 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 CCDC189A1A4V9 331 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 ZNF860A6NHJ4 632 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 FOXO6A8MYZ6 492 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 IDSB3KWA1 339 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TRIM49D1C9J1S8 452 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 SGK494L7N484 410 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 MAP2K7O14733 419 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 NDUFS4O43181 175 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 KLHL18O94889 574 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 SIX3O95343 332 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 RPS17P08708 135 aaKnown RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 C1GALT1C1LP0DN25 315 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 PHBP35232 272 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 SOX11P35716 441 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 GLRBP48167 497 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 VSNL1P62760 191 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TRAF3Q13114 568 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 DOC2AQ14183 400 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TBCCQ15814 346 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 LACTB2Q53H82 288 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 CRB2Q5IJ48 1285 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 IGFL2Q6UWQ7 119 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 ZNF793Q6ZN11 406 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TIFABQ6ZNK6 161 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 LANCL3Q6ZV70 420 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 FRA10AC1Q70Z53 315 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TRMT10CQ7L0Y3 403 aaKnown RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 CCDC91Q7Z6B0 441 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 RAB43Q86YS6 212 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 LAS2Q8IYD9 372 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TCAIMQ8N3R3 496 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 RBMXL3Q8N7X1 1067 aaKnown RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 TMEM102Q8N9M5 508 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 TMEM52Q8NDY8 209 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 SLC13A3Q8WWT9 602 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 EXT2Q93063 718 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 RERGQ96A58 199 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 NACC2Q96BF6 587 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 MS4A6EQ96DS6 147 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TRIM44Q96DX7 344 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 EGFL8Q99944 293 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 CD244Q9BZW8 370 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TSPYL1Q9H0U9 437 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 RHBGQ9H310 441 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 ZNF552Q9H707 407 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 NT5DC2Q9H857 520 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 NMRAL1Q9HBL8 299 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 MKKSQ9NPJ1 570 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 ZNF71Q9NQZ8 489 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 SEMA3GQ9NS98 782 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 DNAJC11Q9NVH1 559 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 C14orf105Q9NVL8 296 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 IRAK4Q9NWZ3 460 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 WWOXQ9NZC7 414 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 HCN3Q9P1Z3 774 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 TXNDC16Q9P2K2 825 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 XPR1Q9UBH6 696 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 ZNF282Q9UDV7 671 aaPredicted RBP8.2□□□□□ -1.1
SMG6-216ENST00000575176 ZNF225Q9UK10 706 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 ACOT9Q9Y305 439 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 NAALAD2Q9Y3Q0 740 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 CSAG2Q9Y5P2 127 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 DOPEY1Q5JWR5 2465 aa8.2□□□□□ -1.1
SMG6-216ENST00000575176 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
SMG6-216ENST00000575176 IGHV1-45A0A0A0MS14 117 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 LRIT2A6NDA9 550 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 PYCARD-AS1I3L0S3 204 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 TXNDC9O14530 226 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 OR7A17O14581 309 aa8.19□□□□□ -1.1
SMG6-216ENST00000575176 OR1F1O43749 312 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms