RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CD82P27701 267 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 ARRB2P32121 409 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 GCGRP47871 477 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 ATP1A2P50993 1020 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 STXBP1P61764 594 aaKnown RBP16.28■□□□□ 0.2
NUP88-210ENST00000574867 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 MUM1Q2TAK8 710 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 CES4AQ5XG92 561 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 FAM76AQ8TAV0 307 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 ULBP3Q9BZM4 244 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 SHCBP1LQ9BZQ2 653 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 SLC7A5P2Q9GIP4 190 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 SLC6A16Q9GZN6 736 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 ACTR5Q9H9F9 607 aaPredicted RBP16.28■□□□□ 0.2
NUP88-210ENST00000574867 ASCL3Q9NQ33 180 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 DMRT3Q9NQL9 472 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 STARD5Q9NSY2 213 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 AK5Q9Y6K8 562 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 TRABD2BA6NFA1 517 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 AZIN1O14977 448 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 TIAF1O95411 115 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 FGF4P08620 206 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 DDX39BQ13838 428 aaKnown RBP16.28■□□□□ 0.2
NUP88-210ENST00000574867 ADNP2Q6IQ32 1131 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 RHBDD2Q6NTF9 364 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 TMEM214Q6NUQ4 689 aaKnown RBP16.28■□□□□ 0.2
NUP88-210ENST00000574867 LRRC8CQ8TDW0 803 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 SELENOMQ8WWX9 145 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 CMTM7Q96FZ5 175 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 KCNA7Q96RP8 456 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 MTERF1Q99551 399 aaKnown RBP16.28■□□□□ 0.2
NUP88-210ENST00000574867 CUTCQ9NTM9 273 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 ANGPTL2Q9UKU9 493 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.28■□□□□ 0.2
NUP88-210ENST00000574867 RAP2CQ9Y3L5 183 aa16.28■□□□□ 0.2
NUP88-210ENST00000574867 MANBAO00462 879 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 SNNO75324 88 aaPredicted RBP16.27■□□□□ 0.2
NUP88-210ENST00000574867 ULK1O75385 1050 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 LYPLA1O75608 230 aaPredicted RBP16.27■□□□□ 0.2
NUP88-210ENST00000574867 CHEK2O96017 543 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 HSD3B1P14060 373 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 HSD3B2P26439 372 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 SH2D4BQ5SQS7 431 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 KANK2Q63ZY3 851 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 ABHD13Q7L211 337 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 ARHGEF39Q8N4T4 335 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 PROKR1Q8TCW9 393 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 ZNF75CPQ92670 426 aaPredicted RBP16.27■□□□□ 0.2
NUP88-210ENST00000574867 MVB12AQ96EY5 273 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 C10orf90Q96M02 699 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 LRFN5Q96NI6 719 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 MS4A8Q9BY19 250 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 BRF2Q9HAW0 419 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 TXLNGQ9NUQ3 528 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 FOXJ2Q9P0K8 574 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 HAO1Q9UJM8 370 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 ACSL6Q9UKU0 697 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 SLC22A7Q9Y694 548 aa16.27■□□□□ 0.2
NUP88-210ENST00000574867 ITM2AO43736 263 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 BRINP1O60477 761 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 KIAA0754O94854 1291 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 STATHP02808 62 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 SLC5A2P31639 672 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 FOXA1P55317 472 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 HYAL2Q12891 473 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 FAM53BQ14153 422 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 ADPRMQ3LIE5 342 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 NIPAL1Q6NVV3 410 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 RNF165Q6ZSG1 346 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 CHSY3Q70JA7 882 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 CLYBLQ8N0X4 340 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 KCT2Q8NC54 265 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 CKAP2Q8WWK9 683 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 GAL3ST3Q96A11 431 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 CLIP3Q96DZ5 547 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 MAGEB18Q96M61 343 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 ZNF578Q96N58 590 aaPredicted RBP16.26■□□□□ 0.19
NUP88-210ENST00000574867 MACROD1Q9BQ69 325 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 CENPKQ9BS16 269 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 ILKAPQ9H0C8 392 aaPredicted RBP16.26■□□□□ 0.19
NUP88-210ENST00000574867 TNFRSF12AQ9NP84 129 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 TMEM184BQ9Y519 407 aaPredicted RBP16.26■□□□□ 0.19
NUP88-210ENST00000574867 TIMM22Q9Y584 194 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 A0A1B0GX78 115 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 LRIT2A6NDA9 550 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 MAGEB17A8MXT2 336 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 DSCR3O14972 297 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 STK17BO94768 372 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 NEK2P51955 445 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 SKP1P63208 163 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 TGM3Q08188 693 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 CSTF3Q12996 717 aaKnown RBP16.26■□□□□ 0.19
NUP88-210ENST00000574867 HERC3Q15034 1050 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 TMEM35AQ53FP2 167 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 TOR1AIP1Q5JTV8 583 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 PRAMEF17Q5VTA0 474 aa16.26■□□□□ 0.19
NUP88-210ENST00000574867 AFAP1L2Q8N4X5 818 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms