RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 BTNL2Q9UIR0 455 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 EXO1Q9UQ84 846 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 RFXANKO14593 260 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 RPL3P39023 403 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 ACTR1BP42025 376 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 ACTR1AP61163 376 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 CPTPQ5TA50 214 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 KHDRBS2Q5VWX1 349 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 LPCAT4Q643R3 524 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 SLC22A18ASQ8N1D0 253 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 ADCY4Q8NFM4 1077 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 CCL4L1Q8NHW4 92 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 THUMPD3Q9BV44 507 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 DUSP26Q9BV47 211 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 SARGQ9BW04 601 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 GPR174Q9BXC1 333 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 WBP11Q9Y2W2 641 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 GMEB1Q9Y692 573 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 RASGRP1O95267 797 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 LAMP1P11279 417 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 PIM1P11309 404 aaPredicted RBP27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 F3P13726 295 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 HRH2P25021 359 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 PDE7AQ13946 482 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 HKDC1Q2TB90 917 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 GTDC1Q4AE62 458 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 ANXA8L1Q5VT79 327 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 IZUMO2Q6UXV1 221 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 IKBIPQ70UQ0 350 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 CALHM3Q86XJ0 350 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 CATSPER1Q8NEC5 780 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 TTLQ8NG68 377 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 WDR48Q8TAF3 677 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 GPBAR1Q8TDU6 330 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 MTERF3Q96E29 417 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 PHF12Q96QT6 1004 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 ORAI3Q9BRQ5 295 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 REEP4Q9H6H4 257 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 PRM3Q9NNZ6 103 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 TMEM184CQ9NVA4 438 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 BTBD3Q9Y2F9 522 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 HEATR5BQ9P2D3 2071 aa27.23■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZDBF2Q9HCK1 2354 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 PRAMEF33A0A0G2JMD5 474 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 A0A1W2PPC4 97 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 TRBC2A0A5B9 178 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 DHRS12A0PJE2 317 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 CCNDBP1O95273 360 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 TNFP01375 233 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 GGT1P19440 569 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 GSTM2P28161 218 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 FAM71E1Q6IPT2 247 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 MAMSTRQ6ZN01 415 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 ANKRD46Q86W74 232 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 TICAM1Q8IUC6 712 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZNF548Q8NEK5 533 aaPredicted RBP27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR2T12Q8NG77 320 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 C16orf78Q8WTQ4 265 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 USP22Q9UPT9 525 aa27.22■■□□□ 1.95
CTDNEP1-210ENST00000574322 IGHV1OR15-9A0A0B4J2B8 117 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 CDKN2CP42773 168 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 GZMMP51124 257 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 MTX3Q5HYI7 312 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 GLYATQ6IB77 296 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 DNAJC14Q6Y2X3 702 aaPredicted RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 R3HCC1LQ7Z5L2 792 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 PDSS2Q86YH6 399 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 PHACTR4Q8IZ21 702 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 ADGRG5Q8IZF4 528 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR52E4Q8NGH9 312 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZFPM2Q8WW38 1151 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 MIEF2Q96C03 454 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZNF717Q9BY31 904 aaPredicted RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 BHLHE41Q9C0J9 482 aaPredicted RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 RPF2Q9H7B2 306 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 GORASP2Q9H8Y8 452 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 MRPS30Q9NP92 439 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 KLF15Q9UIH9 416 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 SPTY2D1-AS1A0A0U1RR47 76 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 GPR37L1O60883 481 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 CLEC3AO75596 197 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 B3GALT4O96024 378 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 PSMA4P25789 261 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 PEBP1P30086 187 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 AVPR2P30518 371 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 SLC19A1P41440 591 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 ILF3Q12906 894 aaKnown RBP eCLIP27.21■■□□□ 1.955e-15■■■■□ 23
CTDNEP1-210ENST00000574322 SLC30A9Q6PML9 568 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 AMIGO1Q86WK6 493 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 DTWD1Q8N5C7 304 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 PAPD5Q8NDF8 572 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 VPS37AQ8NEZ2 397 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR2L3Q8NG85 312 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR10A6Q8NH74 314 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 INVSQ9Y283 1065 aa27.21■■□□□ 1.95
CTDNEP1-210ENST00000574322 PRR33A8MZF0 331 aa27.2■■□□□ 1.94
CTDNEP1-210ENST00000574322 FAM220BPB1ANY3 271 aa27.2■■□□□ 1.94
CTDNEP1-210ENST00000574322 SAP18O00422 153 aaKnown RBP27.2■■□□□ 1.94
CTDNEP1-210ENST00000574322 YY2O15391 372 aa27.2■■□□□ 1.94
CTDNEP1-210ENST00000574322 ZCCHC18P0CG32 403 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms