RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SLC5A11Q8WWX8 675 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 SMIM10Q96HG1 83 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 AGAP4Q96P64 663 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 TMEM79Q9BSE2 394 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 PELI2Q9HAT8 420 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 TXNDC16Q9P2K2 825 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 CTNNAL1Q9UBT7 734 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 MKL2Q9ULH7 1088 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 CNTRLQ7Z7A1 2325 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 NSG1A0A0A6YYJ2 146 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 VPS4BO75351 444 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 SERPINA7P05543 415 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 ITGAMP11215 1152 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 STX2P32856 288 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 TSFMP43897 325 aaKnown RBP16.34■□□□□ 0.21
SMG6-212ENST00000573153 AVPR1BP47901 424 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 SLC12A2P55011 1212 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 RHAGQ02094 409 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 PWP1Q13610 501 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 KBTBD12Q3ZCT8 623 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 UBAP2Q5T6F2 1119 aaKnown RBP16.34■□□□□ 0.21
SMG6-212ENST00000573153 GRTP1Q5TC63 336 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
SMG6-212ENST00000573153 ZADH2Q8N4Q0 377 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 MMGT1Q8N4V1 131 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 EFCAB3Q8N7B9 438 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 CATSPER1Q8NEC5 780 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 OR51Q1Q8NH59 317 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 CREB3L4Q8TEY5 395 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 RHBDF1Q96CC6 855 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 UBXN10Q96LJ8 280 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 TSNARE1Q96NA8 513 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 LRRC1Q9BTT6 524 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 UNKQ9C0B0 810 aaKnown RBP16.34■□□□□ 0.21
SMG6-212ENST00000573153 SLC6A16Q9GZN6 736 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 COPG2Q9UBF2 871 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 VPS4AQ9UN37 437 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 SLC22A14Q9Y267 594 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 NAALAD2Q9Y3Q0 740 aa16.34■□□□□ 0.21
SMG6-212ENST00000573153 IGHV3-20A0A0C4DH32 117 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 ZNF860A6NHJ4 632 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 TAPBPO15533 448 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 PHGDHO43175 533 aaKnown RBP16.33■□□□□ 0.2
SMG6-212ENST00000573153 GALR3O60755 368 aaPredicted RBP16.33■□□□□ 0.2
SMG6-212ENST00000573153 URI1O94763 535 aaPredicted RBP16.33■□□□□ 0.2
SMG6-212ENST00000573153 HEXBP07686 556 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 SLC35G6P0C7Q6 338 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 STMN1P16949 149 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 SPRP35270 261 aaPredicted RBP16.33■□□□□ 0.2
SMG6-212ENST00000573153 AHRP35869 848 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 GGT5P36269 586 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 XCR1P46094 333 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 ATP6V0D1P61421 351 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 USP10Q14694 798 aaKnown RBP16.33■□□□□ 0.2
SMG6-212ENST00000573153 TGFBIQ15582 683 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 B3GNTL1Q67FW5 361 aaPredicted RBP16.33■□□□□ 0.2
SMG6-212ENST00000573153 ISLR2Q6UXK2 745 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 RELL1Q8IUW5 271 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 KBTBD2Q8IY47 623 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 SPATA6LQ8N4H0 392 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 TBC1D19Q8N5T2 526 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 TM9SF4Q92544 642 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 LMF1Q96S06 567 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 CYTH2Q99418 400 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 NPAS2Q99743 824 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 ZFP69BQ9UJL9 534 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 ASB1Q9Y576 335 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 ESPL1Q14674 2120 aa16.33■□□□□ 0.2
SMG6-212ENST00000573153 ESYT3A0FGR9 886 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 BLACEA4D250 179 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 NDUFS4O43181 175 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 C8orf89P0DMQ9 161 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 CD1DP15813 335 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 EPORP19235 508 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 VARSP26640 1264 aaKnown RBP16.32■□□□□ 0.2
SMG6-212ENST00000573153 GDF5P43026 501 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 KCNC1P48547 511 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 RAB10P61026 200 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 SLC7A5Q01650 507 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 DLG1Q12959 904 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 SPTAN1Q13813 2472 aaKnown RBP16.32■□□□□ 0.2
SMG6-212ENST00000573153 CSHL1Q14406 222 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 HERC3Q15034 1050 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 NR6A1Q15406 480 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 ZNF324BQ6AW86 544 aaPredicted RBP16.32■□□□□ 0.2
SMG6-212ENST00000573153 NIPAL1Q6NVV3 410 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 NXPE4Q6UWF7 544 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 LINC00696Q6ZRV3 163 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 RIPOR1Q6ZS17 1223 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 VN1R5Q7Z5H4 357 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 ANKRD37Q7Z713 158 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 CCDC25Q86WR0 208 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 TCAIMQ8N3R3 496 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 UTP15Q8TED0 518 aaKnown RBP16.32■□□□□ 0.2
SMG6-212ENST00000573153 FBF1Q8TES7 1133 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 TSLPQ969D9 159 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 YIPF2Q9BWQ6 316 aa16.32■□□□□ 0.2
SMG6-212ENST00000573153 ILKAPQ9H0C8 392 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms