RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PCSK5Q92824 1860 aa15.02■□□□□ -0
CHD3-215ENST00000572750 E2F3O00716 465 aa15.02■□□□□ -0
CHD3-215ENST00000572750 FOXS1O43638 330 aa15.02■□□□□ -0
CHD3-215ENST00000572750 GLRA3O75311 464 aa15.02■□□□□ -0
CHD3-215ENST00000572750 CREG1O75629 220 aa15.02■□□□□ -0
CHD3-215ENST00000572750 FURINP09958 794 aa15.02■□□□□ -0
CHD3-215ENST00000572750 EPB42P16452 691 aa15.02■□□□□ -0
CHD3-215ENST00000572750 IL1RNP18510 177 aa15.02■□□□□ -0
CHD3-215ENST00000572750 FBLP22087 321 aaKnown RBP15.02■□□□□ -0
CHD3-215ENST00000572750 AHRP35869 848 aa15.02■□□□□ -0
CHD3-215ENST00000572750 IRF8Q02556 426 aa15.02■□□□□ -0
CHD3-215ENST00000572750 CHIT1Q13231 466 aa15.02■□□□□ -0
CHD3-215ENST00000572750 GTF2H2Q13888 395 aa15.02■□□□□ -0
CHD3-215ENST00000572750 ERV3-1Q14264 604 aa15.02■□□□□ -0
CHD3-215ENST00000572750 PCBP2Q15366 365 aaKnown RBP eCLIP15.02■□□□□ -0
CHD3-215ENST00000572750 GARNL3Q5VVW2 1013 aa15.02■□□□□ -0
CHD3-215ENST00000572750 GTF2H2CQ6P1K8 395 aa15.02■□□□□ -0
CHD3-215ENST00000572750 TMIGD1Q6UXZ0 262 aa15.02■□□□□ -0
CHD3-215ENST00000572750 SH2D5Q6ZV89 423 aa15.02■□□□□ -0
CHD3-215ENST00000572750 GOLGA7Q7Z5G4 137 aa15.02■□□□□ -0
CHD3-215ENST00000572750 LCA5Q86VQ0 697 aa15.02■□□□□ -0
CHD3-215ENST00000572750 CNPY4Q8N129 248 aa15.02■□□□□ -0
CHD3-215ENST00000572750 OR9A4Q8NGU2 314 aa15.02■□□□□ -0
CHD3-215ENST00000572750 TTC9Q92623 222 aa15.02■□□□□ -0
CHD3-215ENST00000572750 FKBP10Q96AY3 582 aa15.02■□□□□ -0
CHD3-215ENST00000572750 ZBTB9Q96C00 473 aa15.02■□□□□ -0
CHD3-215ENST00000572750 WDR34Q96EX3 536 aa15.02■□□□□ -0
CHD3-215ENST00000572750 PTCD3Q96EY7 689 aaKnown RBP15.02■□□□□ -0
CHD3-215ENST00000572750 C17orf62Q9BQA9 187 aa15.02■□□□□ -0
CHD3-215ENST00000572750 CAPS2Q9BXY5 557 aa15.02■□□□□ -0
CHD3-215ENST00000572750 LGALS13Q9UHV8 139 aa15.02■□□□□ -0
CHD3-215ENST00000572750 TMCO1Q9UM00 188 aa15.02■□□□□ -0
CHD3-215ENST00000572750 PADI2Q9Y2J8 665 aa15.02■□□□□ -0
CHD3-215ENST00000572750 SCN3AQ9NY46 2000 aa15.02□□□□□ -0.01
CHD3-215ENST00000572750 USP9YO00507 2555 aaPredicted RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 CDC14CA4D256 554 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 STX16-NPEPL1H3BU86 382 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 STX16O14662 325 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 H2AFYO75367 372 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 KLF7O75840 302 aaPredicted RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 GSTA1P08263 222 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 KRT4P19013 534 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 CXCR2P25025 360 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 RGS1Q08116 209 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 ZNF844Q08AG5 666 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 DSG2Q14126 1118 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 NDUFA9Q16795 377 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 MRPL14Q6P1L8 145 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 PRMT9Q6P2P2 845 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 SHISA6Q6ZSJ9 500 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 RPS27LQ71UM5 84 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 SYVN1Q86TM6 617 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 MYLK4Q86YV6 388 aaPredicted RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 KRT78Q8N1N4 520 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 NT5CQ8TCD5 201 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 CCT6BQ92526 530 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 MVB12AQ96EY5 273 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 MMABQ96EY8 250 aaPredicted RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 NSUN5Q96P11 429 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 EFCAB11Q9BUY7 163 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 TRIM4Q9C037 500 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 C12orf65Q9H3J6 166 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 ZNF304Q9HCX3 659 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 ACSS2Q9NR19 701 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 PCTPQ9UKL6 214 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 PTRH2Q9Y3E5 179 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 TNPO3Q9Y5L0 923 aaKnown RBP15.01□□□□□ -0.01
CHD3-215ENST00000572750 NUP210LQ5VU65 1888 aa15.01□□□□□ -0.01
CHD3-215ENST00000572750 ZNF860A6NHJ4 632 aa15□□□□□ -0.01
CHD3-215ENST00000572750 C4orf51C9J302 202 aa15□□□□□ -0.01
CHD3-215ENST00000572750 SGK494L7N484 410 aa15□□□□□ -0.01
CHD3-215ENST00000572750 B3GALT4O96024 378 aa15□□□□□ -0.01
CHD3-215ENST00000572750 RPS17P08708 135 aaKnown RBP15□□□□□ -0.01
CHD3-215ENST00000572750 ZNF888P0CJ79 500 aaPredicted RBP15□□□□□ -0.01
CHD3-215ENST00000572750 TAC1P20366 129 aa15□□□□□ -0.01
CHD3-215ENST00000572750 ARL1P40616 181 aaPredicted RBP15□□□□□ -0.01
CHD3-215ENST00000572750 HNF4AP41235 474 aa15□□□□□ -0.01
CHD3-215ENST00000572750 FOLR3P41439 243 aa15□□□□□ -0.01
CHD3-215ENST00000572750 PIK3CGP48736 1102 aa15□□□□□ -0.01
CHD3-215ENST00000572750 MAT1AQ00266 395 aaKnown RBP15□□□□□ -0.01
CHD3-215ENST00000572750 MC1RQ01726 317 aa15□□□□□ -0.01
CHD3-215ENST00000572750 HYAL2Q12891 473 aa15□□□□□ -0.01
CHD3-215ENST00000572750 PWP1Q13610 501 aa15□□□□□ -0.01
CHD3-215ENST00000572750 FAM53BQ14153 422 aa15□□□□□ -0.01
CHD3-215ENST00000572750 TBCCQ15814 346 aa15□□□□□ -0.01
CHD3-215ENST00000572750 SYT16Q17RD7 645 aa15□□□□□ -0.01
CHD3-215ENST00000572750 KRT71Q3SY84 523 aa15□□□□□ -0.01
CHD3-215ENST00000572750 PAGE2BQ5JRK9 111 aa15□□□□□ -0.01
CHD3-215ENST00000572750 OVCH1Q7RTY7 1134 aa15□□□□□ -0.01
CHD3-215ENST00000572750 VN1R5Q7Z5H4 357 aa15□□□□□ -0.01
CHD3-215ENST00000572750 TRABD2AQ86V40 505 aa15□□□□□ -0.01
CHD3-215ENST00000572750 PDSS2Q86YH6 399 aa15□□□□□ -0.01
CHD3-215ENST00000572750 SRRM1Q8IYB3 904 aaKnown RBP15□□□□□ -0.01
CHD3-215ENST00000572750 AMER3Q8N944 861 aa15□□□□□ -0.01
CHD3-215ENST00000572750 CREB3L4Q8TEY5 395 aa15□□□□□ -0.01
CHD3-215ENST00000572750 TMEM237Q96Q45 408 aa15□□□□□ -0.01
CHD3-215ENST00000572750 ROPN1BQ9BZX4 212 aaPredicted RBP15□□□□□ -0.01
CHD3-215ENST00000572750 SLC6A16Q9GZN6 736 aa15□□□□□ -0.01
CHD3-215ENST00000572750 SOX17Q9H6I2 414 aaPredicted RBP15□□□□□ -0.01
CHD3-215ENST00000572750 IPPKQ9H8X2 491 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms