RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 IPO7O95373 1038 aaKnown RBP18.61■□□□□ 0.57
CCDC40-206ENST00000572083 F7P08709 466 aaPredicted RBP18.61■□□□□ 0.57
CCDC40-206ENST00000572083 ZSCAN5DPP0CG00 497 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 CCDC71Q8IV32 467 aaPredicted RBP18.61■□□□□ 0.57
CCDC40-206ENST00000572083 CCDC89Q8N998 374 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 CAMKVQ8NCB2 501 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 PLPP5Q8NEB5 264 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 LILRB4Q8NHJ6 448 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 GIMAP7Q8NHV1 300 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 KCNJ16Q9NPI9 418 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 TMEM184CQ9NVA4 438 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 SYBUQ9NX95 663 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 PAK5Q9P286 719 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 KCNE1BA0A087WTH5 132 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 PFDN6O15212 129 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 TFEBP19484 476 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 MGAT1P26572 445 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 CLCN7P51798 805 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 ADARP55265 1226 aaKnown RBP18.6■□□□□ 0.57
CCDC40-206ENST00000572083 TBPL1P62380 186 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 MYBPHQ13203 477 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 CMPK2Q5EBM0 449 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 TMEM211Q6ICI0 200 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 SLC26A11Q86WA9 606 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 SULF2Q8IWU5 870 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 PRELID2Q8N945 189 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 POGLUT1Q8NBL1 392 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 FBXO15Q8NCQ5 510 aaPredicted RBP18.6■□□□□ 0.57
CCDC40-206ENST00000572083 RND1Q92730 232 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 TM4SF19Q96DZ7 209 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 OR1F2PQ96R84 312 aa18.6■□□□□ 0.57
CCDC40-206ENST00000572083 CCDC177Q9NQR7 707 aaPredicted RBP18.6■□□□□ 0.57
CCDC40-206ENST00000572083 ABCA2Q9BZC7 2435 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 PRMT3O60678 531 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 ZWINTO95229 277 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 FHP07954 510 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 HLCSP50747 726 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 MLF1P58340 268 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 BASP1P80723 227 aaKnown RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 CES4AQ5XG92 561 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 ASPGQ86U10 573 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 TGIF2LYQ8IUE0 185 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 SYCE1Q8N0S2 351 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 CYP4X1Q8N118 509 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 SLC13A3Q8WWT9 602 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 ASB11Q8WXH4 323 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 SEC16BQ96JE7 1060 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 PANX2Q96RD6 677 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 TCF12Q99081 682 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 KIFC1Q9BW19 673 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 TP63Q9H3D4 680 aaPredicted RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 TRIM45Q9H8W5 580 aaPredicted RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 EIF2B3Q9NR50 452 aaKnown RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 CCM2LQ9NUG4 571 aaPredicted RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 BFARQ9NZS9 450 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 KCNN3Q9UGI6 736 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 KLF13Q9Y2Y9 288 aaPredicted RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 PRRC2AP48634 2157 aaKnown RBP18.59■□□□□ 0.57
CCDC40-206ENST00000572083 ACANP16112 2415 aa18.59■□□□□ 0.57
CCDC40-206ENST00000572083 LCMT2O60294 686 aaKnown RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 PDE9AO76083 593 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 HOXD4P09016 255 aaPredicted RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 OGNP20774 298 aaKnown RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 RPL22P35268 128 aaKnown RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 SKIV2L2P42285 1042 aaKnown RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 NR0B1P51843 470 aaKnown RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 GPR85P60893 370 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 OLR1P78380 273 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 TTLL9Q3SXZ7 439 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 CAPN13Q6MZZ7 669 aaPredicted RBP18.58■□□□□ 0.56
CCDC40-206ENST00000572083 RAD9BQ6WBX8 426 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 CENPUQ71F23 418 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 THAP11Q96EK4 314 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 CXXC4Q9H2H0 198 aa18.58■□□□□ 0.56
CCDC40-206ENST00000572083 FAM221AA4D161 298 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 USP27XA6NNY8 438 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 CDK2AP1O14519 115 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 ZBTB14O43829 449 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 PEX1O43933 1283 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 B4GALT2O60909 372 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 DNAJB6O75190 326 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 B3GALT4O96024 378 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 SLC35G6P0C7Q6 338 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 KLK2P20151 261 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 HRH2P25021 359 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 TRHRP34981 398 aaPredicted RBP18.57■□□□□ 0.56
CCDC40-206ENST00000572083 NPY2RP49146 381 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 NUP107P57740 925 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 MPP1Q00013 466 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 PMPCAQ10713 525 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 EMC4Q5J8M3 183 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 SEL1L2Q5TEA6 688 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 UBE2R2Q712K3 238 aaPredicted RBP18.57■□□□□ 0.56
CCDC40-206ENST00000572083 KIAA1328Q86T90 577 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 CILP2Q8IUL8 1156 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 CHDHQ8NE62 594 aaPredicted RBP18.57■□□□□ 0.56
CCDC40-206ENST00000572083 TBC1D20Q96BZ9 403 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 HES6Q96HZ4 224 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 FOXC2Q99958 501 aa18.57■□□□□ 0.56
CCDC40-206ENST00000572083 FRMD8P1Q9BZ68 369 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms