RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 BMPR2Q13873 1038 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 UAP1Q16222 522 aaPredicted RBP16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 LANCL3Q6ZV70 420 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 KBTBD2Q8IY47 623 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 CISD2Q8N5K1 135 aaKnown RBP16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 SNX31Q8N9S9 440 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 ANKRD53Q8N9V6 530 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 METTL21AQ8WXB1 218 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 C19orf60Q96EN9 201 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 TMEM79Q9BSE2 394 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 FAM129AQ9BZQ8 928 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 CD274Q9NZQ7 290 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 PTGFRNQ9P2B2 879 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 ZFP69BQ9UJL9 534 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 RNF112Q9ULX5 631 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 SLC22A7Q9Y694 548 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 TAPBPO15533 448 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 PRR35P0CG20 571 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 ALOX12P18054 663 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 SLC6A12P48065 614 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 GLRBP48167 497 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 RAB8AP61006 207 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 ATP6V0D1P61421 351 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 PWP1Q13610 501 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 SLBPQ14493 270 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 HERC3Q15034 1050 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 PCOLCEQ15113 449 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 IGFL3Q6UXB1 125 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 CUZD1Q86UP6 607 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 SIRT6Q8N6T7 355 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 NT5CQ8TCD5 201 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 BRIX1Q8TDN6 353 aaKnown RBP16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 IFT81Q8WYA0 676 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 CCT6BQ92526 530 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 WDR77Q9BQA1 342 aaPredicted RBP16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 SARGQ9BW04 601 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 KLHL31Q9H511 634 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 EPS8L2Q9H6S3 715 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 ALG9Q9H6U8 611 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 RIC8BQ9NVN3 520 aa16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 DMGDHQ9UI17 866 aaKnown RBP16.8■□□□□ 0.28
CTDNEP1-207ENST00000572043 SEC24DO94855 1032 aaPredicted RBP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 S100BP04271 92 aaPredicted RBP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 C1GALT1C1LP0DN25 315 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 GNAZP19086 355 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 AHRP35869 848 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 DLG1Q12959 904 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 CDC16Q13042 620 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 TOR1AIP1Q5JTV8 583 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 MROH9Q5TGP6 573 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 TMEM205Q6UW68 189 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 ABHD13Q7L211 337 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 IQCKQ8N0W5 287 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 MMGT1Q8N4V1 131 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 DNAJB14Q8TBM8 379 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 UTP15Q8TED0 518 aaKnown RBP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 KIAA1191Q96A73 305 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 SNRNP40Q96DI7 357 aaKnown RBP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 MAGEB10Q96LZ2 347 aaPredicted RBP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 CYTH2Q99418 400 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 PRM3Q9NNZ6 103 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 DNAJC11Q9NVH1 559 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 NINJ2Q9NZG7 142 aa16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 MTRF1LQ9UGC7 380 aaKnown RBP16.79■□□□□ 0.28
CTDNEP1-207ENST00000572043 LOC102723996A0A087X1L8 192 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 CCNT2O60583 730 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 GALR3O60755 368 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 H2AFYO75367 372 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 F10P00742 488 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 SERPINA7P05543 415 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 CTAGE8P0CG41 777 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 SLC35E2BP0CK96 405 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 TFEBP19484 476 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 KCNC1P48547 511 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 IRF9Q00978 393 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 NAB1Q13506 487 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 B3GNTL1Q67FW5 361 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 SULT1C3Q6IMI6 304 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 ISLR2Q6UXK2 745 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 SLCO4C1Q6ZQN7 724 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 Q6ZS92 163 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 CPEB2Q7Z5Q1 589 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 TBC1D1Q86TI0 1168 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 CTAGE4Q8IX94 777 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 TCAIMQ8N3R3 496 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 AFAP1L2Q8N4X5 818 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 CATSPER1Q8NEC5 780 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 MNS1Q8NEH6 495 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 TRPV3Q8NET8 790 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 UBXN10Q96LJ8 280 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 ZNF700Q9H0M5 742 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 RHBGQ9H310 441 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 PLA2G3Q9NZ20 509 aa16.78■□□□□ 0.28
CTDNEP1-207ENST00000572043 MED13Q9UHV7 2174 aa16.77■□□□□ 0.28
CTDNEP1-207ENST00000572043 A0A0G2JN53 185 aa16.77■□□□□ 0.28
CTDNEP1-207ENST00000572043 SUPT3HB4E1H0 165 aa16.77■□□□□ 0.28
CTDNEP1-207ENST00000572043 C4orf51C9J302 202 aa16.77■□□□□ 0.28
CTDNEP1-207ENST00000572043 CLGNO14967 610 aa16.77■□□□□ 0.28
CTDNEP1-207ENST00000572043 CHST10O43529 356 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms