RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 SKP1P63208 163 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 OLR1P78380 273 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 REEP5Q00765 189 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 ZNF33BQ06732 778 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 TSNQ15631 228 aaKnown RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 BTBD16Q32M84 506 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 DEFB134Q4QY38 66 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 RIPOR1Q6ZS17 1223 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 ADAMTSL2Q86TH1 951 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 NKAPQ8N5F7 415 aaKnown RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 AMER2Q8N7J2 671 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 CATSPER1Q8NEC5 780 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 OR1N1Q8NGS0 311 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 CDKL2Q92772 493 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 TM4SF19Q96DZ7 209 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 MOCOSQ96EN8 888 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 CNTRLQ7Z7A1 2325 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 WDR47O94967 919 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CBX6O95503 412 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 B3GALT4O96024 378 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 SSTR1P30872 391 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 HNF4AP41235 474 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ABRAXAS2Q15018 415 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ABHD17BQ5VST6 288 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ABHD13Q7L211 337 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 MAATS1Q7Z4T9 603 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CPEB2Q7Z5Q1 589 aaKnown RBP12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CEP97Q8IW35 865 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ST6GALNAC3Q8NDV1 305 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ANKRD49Q8WVL7 239 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 PSMF1Q92530 271 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 TSLPQ969D9 159 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 PDLIM5Q96HC4 596 aaKnown RBP12.88□□□□□ -0.35
PRPF8-202ENST00000571346 LMF1Q96S06 567 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CYTH2Q99418 400 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ERP44Q9BS26 406 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CAB39LQ9H9S4 337 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 OLAHQ9NV23 265 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 MOCS1Q9NZB8 636 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 WHRNQ9P202 907 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 CTNNAL1Q9UBT7 734 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 PLEKHB1Q9UF11 243 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-202ENST00000571346 TEKT2Q9UIF3 430 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-202ENST00000571346 SLC22A14Q9Y267 594 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 OARD1Q9Y530 152 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 SLC22A7Q9Y694 548 aa12.88□□□□□ -0.35
PRPF8-202ENST00000571346 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRPF8-202ENST00000571346 TRAV17A0A0B4J275 112 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 FAM187AA6NFU0 413 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 A8MUI8 341 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 E2F3O00716 465 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 PHGDHO43175 533 aaKnown RBP12.87□□□□□ -0.35
PRPF8-202ENST00000571346 WDPCPO95876 746 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 FHP07954 510 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 CYC1P08574 325 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 ICAM2P13598 275 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 ALOX12P18054 663 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 CASQ1P31415 396 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 SCTRP47872 440 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 AGTR2P50052 363 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 TNFSF10P50591 281 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 PWP1Q13610 501 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 RBBP5Q15291 538 aaKnown RBP12.87□□□□□ -0.35
PRPF8-202ENST00000571346 FCRLBQ6BAA4 426 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 HIST2H2BCQ6DN03 193 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 ANKRD37Q7Z713 158 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 SPATA6LQ8N4H0 392 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 BCORP1Q8N888 145 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 OR4K1Q8NGD4 311 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 EXT2Q93063 718 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 C5orf34Q96MH7 638 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 PELI2Q9HAT8 420 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 WWOXQ9NZC7 414 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 ZFP69BQ9UJL9 534 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 KCNE2Q9Y6J6 123 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 ICE1Q9Y2F5 2266 aa12.87□□□□□ -0.35
PRPF8-202ENST00000571346 TCRBV9S1A1TA0A576 114 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 CTAGE15A4D2H0 777 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 CXorf49A8MYA2 514 aaPredicted RBP12.86□□□□□ -0.35
PRPF8-202ENST00000571346 GALR3O60755 368 aaPredicted RBP12.86□□□□□ -0.35
PRPF8-202ENST00000571346 JAK1P23458 1154 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 AHRP35869 848 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 HNMTP50135 292 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 RAB8AP61006 207 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 POU4F1Q01851 419 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 USP10Q14694 798 aaKnown RBP12.86□□□□□ -0.35
PRPF8-202ENST00000571346 SLMAPQ14BN4 828 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 NSDHLQ15738 373 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 C18orf21Q32NC0 220 aaPredicted RBP12.86□□□□□ -0.35
PRPF8-202ENST00000571346 SFT2D3Q587I9 215 aa12.86□□□□□ -0.35
PRPF8-202ENST00000571346 PLAG1Q6DJT9 500 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms