RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GSTA1P08263 222 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 PRF1P14222 555 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 CREB1P16220 341 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 EEF1DP29692 281 aaKnown RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 ARL1P40616 181 aaPredicted RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 RRADP55042 308 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 VSX2P58304 361 aaPredicted RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 RAPSNQ13702 412 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SETDB1Q15047 1291 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 BPHLQ86WA6 291 aaPredicted RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 PAQR7Q86WK9 346 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 MCEMP1Q8IX19 187 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 DNAJC22Q8N4W6 341 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 TEX9Q8N6V9 391 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 OR1L3Q8NH93 324 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SLC5A11Q8WWX8 675 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 ZUFSPQ96AP4 578 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 ZNF501Q96CX3 271 aaPredicted RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SMC6Q96SB8 1091 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 CD244Q9BZW8 370 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SLC7A5P2Q9GIP4 190 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SPRTNQ9H040 489 aaPredicted RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 OPTCQ9UBM4 332 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 PLCL2Q9UPR0 1127 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 KCNE2Q9Y6J6 123 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 MED13Q9UHV7 2174 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 LOC105369274A0A096LPK9 316 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 LOC102723532A0A0G2JNH3 316 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 OR2A25A4D2G3 310 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 GOLGA6L10A6NI86 522 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 TARM1B6A8C7 271 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 E7EQ34 232 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 OR2B3O76000 313 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 ALPPP05187 535 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 KLK3P07288 261 aaPredicted RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 SBK3P0C264 359 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 H2AFXP16104 143 aaPredicted RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 SLC6A12P48065 614 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 ALDH18A1P54886 795 aaKnown RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 CSNK1G2P78368 415 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 CDC16Q13042 620 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 NAA25Q14CX7 972 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 RBBP5Q15291 538 aaKnown RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 PDK4Q16654 411 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 CDKL4Q5MAI5 379 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 FRMPD2BQ6IN97 320 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 FBXO42Q6P3S6 717 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 SH2D5Q6ZV89 423 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 MED25Q71SY5 747 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 RPS27LQ71UM5 84 aaKnown RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 MYLK4Q86YV6 388 aaPredicted RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 GPR135Q8IZ08 494 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 OR4N4Q8N0Y3 316 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 CNPY4Q8N129 248 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 ZNF655Q8N720 491 aaPredicted RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 TMEM102Q8N9M5 508 aaPredicted RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 SELENOSQ9BQE4 189 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 AGPAT4Q9NRZ5 378 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 TMEM184CQ9NVA4 438 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 EMCNQ9ULC0 261 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 GRID1Q9ULK0 1009 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 B3GNT3Q9Y2A9 372 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 COPG1Q9Y678 874 aaKnown RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 SHANK1Q9Y566 2161 aa12.68□□□□□ -0.38
CCDC40-205ENST00000571028 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
CCDC40-205ENST00000571028 CCDC189A1A4V9 331 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 A8MT66 165 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 PRSS44E7EML9 344 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 H0YGG7 62 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 K7EPI3 171 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 OR1F1O43749 312 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 DLX3O60479 287 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 H2AFYO75367 372 aaKnown RBP12.67□□□□□ -0.38
CCDC40-205ENST00000571028 SCRG1O75711 98 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 IPO13O94829 963 aaKnown RBP12.67□□□□□ -0.38
CCDC40-205ENST00000571028 SERPIND1P05546 499 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 MYZAPP0CAP1 466 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 MYL2P10916 166 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 TSPAN8P19075 237 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 CRHR1P34998 444 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 GRK3P35626 688 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 GGT5P36269 586 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 GABRA4P48169 554 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 CCR8P51685 355 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 ARF3P61204 181 aaPredicted RBP12.67□□□□□ -0.38
CCDC40-205ENST00000571028 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 XKR6Q5GH73 641 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 VWA5B1Q5TIE3 1220 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 ZNF425Q6IV72 752 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 LRRC70Q7Z2Q7 622 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 HDXQ7Z353 690 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 CROCCP2Q86T23 111 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 BANPQ8N9N5 519 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 ZNF740Q8NDX6 193 aa12.67□□□□□ -0.38
CCDC40-205ENST00000571028 PPP4R1Q8TF05 950 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms