RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 IL7P13232 177 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ETFAP13804 333 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CR2P20023 1033 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RHOAP61586 193 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF177Q13360 481 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CCDC85BQ15834 202 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 HKDC1Q2TB90 917 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 COX20Q5RI15 118 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PTCHD4Q6ZW05 846 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NDUFAF4Q9P032 175 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PCDHGB3Q9Y5G1 929 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GBF1Q92538 1859 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RPL17P18621 184 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 HNF4AP41235 474 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NFE2L1Q14494 772 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DGKKQ5KSL6 1271 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CARNMT1Q8N4J0 409 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 C7orf57Q8NEG2 295 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 USP7Q93009 1102 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 IL26Q9NPH9 171 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DNAH14Q0VDD8 3507 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 KPNA5O15131 536 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ANXA5P08758 320 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MAPKAPK2P49137 400 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PURAQ00577 322 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CSTF3Q12996 717 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TSPAN33Q86UF1 283 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GFM1Q96RP9 751 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PITX2Q99697 317 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ANKHQ9HCJ1 492 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 VCANP13611 3396 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 OTOFQ9HC10 1997 aa19.75■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CYP2A7P20853 494 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ARF5P84085 180 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 WDR53Q7Z5U6 358 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CELF5Q8N6W0 485 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 JPH3Q8WXH2 748 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ASB15Q8WXK1 588 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 VPS35Q96QK1 796 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SNX18Q96RF0 628 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TMEM45AQ9NWC5 275 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CLCA3PQ9Y6N3 262 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PATJQ8NI35 1801 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CAPN5O15484 640 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TMCC2O75069 709 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 KLKB1P03952 638 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CBLP22681 906 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CYP4F8P98187 520 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CHIT1Q13231 466 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GAB1Q13480 694 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 KRR1Q13601 381 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PTGES3Q15185 160 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF79Q15937 498 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 LIPKQ5VXJ0 399 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SPRYD7Q5W111 196 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ANKS3Q6ZW76 656 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 UBE2R2Q712K3 238 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SERPINA11Q86U17 422 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DTX3Q8N9I9 347 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DYRK4Q9NR20 520 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MAN2B2Q9Y2E5 1009 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ACSL4O60488 711 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ALX3O95076 343 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CCNYL3P0C7X3 344 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CNR2P34972 360 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 IQCCQ4KMZ1 466 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TMIGD1Q6UXZ0 262 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 VRK3Q8IV63 474 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SUN5Q8TC36 379 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PIK3R3Q92569 461 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NXF2Q9GZY0 626 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MAGEH1Q9H213 219 aa19.74■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SAP18O00422 153 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ICMTO60725 284 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 AP2A2O94973 939 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TRBC1P01850 177 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 F11P03951 625 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF865P0CJ78 1059 aaPredicted RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GATMP50440 423 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 WNT3P56703 355 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 LRRC74AQ0VAA2 488 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NOXA1Q86UR1 476 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ELMOD2Q8IZ81 293 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NTMT1Q9BV86 223 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 C11orf54Q9H0W9 315 aaPredicted RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 OLA1Q9NTK5 396 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CFL2Q9Y281 166 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 YARS2Q9Y2Z4 477 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CDH23Q9H251 3354 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 A0A0X1KG70 313 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CCDC182A6NF36 153 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PRAMEF25A6NGN4 478 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GNG2P59768 71 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NFATC2Q13469 925 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SLX4IPQ5VYV7 408 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 STK40Q8N2I9 435 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ST13P5Q8NFI4 369 aaPredicted RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SNAPC3Q92966 411 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 LINC00597Q9H2U6 94 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZFYVE1Q9HBF4 777 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms