RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RHBDF1Q96CC6 855 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 CNDP1Q96KN2 507 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 EPS8L2Q9H6S3 715 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 LRRC4CQ9HCJ2 640 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 RIC8BQ9NVN3 520 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 PCDHGA10Q9Y5H3 936 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 SLC22A7Q9Y694 548 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 WDR47O94967 919 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 B3GALT4O96024 378 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 CCDC166P0CW27 439 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 STMN1P16949 149 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 VARSP26640 1264 aaKnown RBP18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 GMPRP36959 345 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 GDF5P43026 501 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 SLC6A12P48065 614 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 HNMTP50135 292 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 ILF2Q12905 390 aaKnown RBP18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 PWP1Q13610 501 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 LRRK2Q5S007 2527 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 C8orf74Q6P047 294 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 NXPE4Q6UWF7 544 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 ISLR2Q6UXK2 745 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 RP1L1Q8IWN7 2480 aaPredicted RBP18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 AFAP1L2Q8N4X5 818 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 FAM26EQ8N5C1 309 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 PPM1NQ8N819 430 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 ANKRD53Q8N9V6 530 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 NT5CQ8TCD5 201 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 ZNF700Q9H0M5 742 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 PTGFRNQ9P2B2 879 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 ZFP69BQ9UJL9 534 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 KCNE2Q9Y6J6 123 aa18.87■□□□□ 0.61
SHCBP1-203ENST00000564272 IGHV3-20A0A0C4DH32 117 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 TCP11X1B4DZS4 312 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 PCDH17O14917 1159 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 URI1O94763 535 aaPredicted RBP18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 SERPINA7P05543 415 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 ZNF888P0CJ79 500 aaPredicted RBP18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 CD1DP15813 335 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 STX2P32856 288 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 AHRP35869 848 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 OLR1P78380 273 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 RGS1Q08116 209 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 MFAP5Q13361 173 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 MRPL49Q13405 166 aaKnown RBP18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 HERC3Q15034 1050 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 TGFBIQ15582 683 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 OR4D1Q15615 310 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 ZKSCAN8Q15776 578 aaPredicted RBP18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 DEFB134Q4QY38 66 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 CRB2Q5IJ48 1285 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 SIRT6Q8N6T7 355 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 DNAJB14Q8TBM8 379 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 FBF1Q8TES7 1133 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 METTL21AQ8WXB1 218 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 PSMF1Q92530 271 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 PEX11GQ96HA9 241 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 AIF1LQ9BQI0 150 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 TMEM79Q9BSE2 394 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 LRRC1Q9BTT6 524 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 ASF1BQ9NVP2 202 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 CNTRLQ7Z7A1 2325 aa18.86■□□□□ 0.61
SHCBP1-203ENST00000564272 GALR3O60755 368 aaPredicted RBP18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 DNAJB6O75190 326 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 CDC123O75794 336 aaPredicted RBP18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 SEC24DO94855 1032 aaPredicted RBP18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 ALOX12P18054 663 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 SOX11P35716 441 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 GLRBP48167 497 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 RAB10P61026 200 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 SLMAPQ14BN4 828 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 RBBP5Q15291 538 aaKnown RBP18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 FBXO48Q5FWF7 155 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 CMC1Q7Z7K0 106 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 KLHDC8AQ8IYD2 350 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 CYTH2Q99418 400 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 SLC29A3Q9BZD2 475 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 NTNG1Q9Y2I2 539 aa18.85■□□□□ 0.61
SHCBP1-203ENST00000564272 PRRC2CQ9Y520 2896 aaKnown RBP18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 USP9XQ93008 2570 aaPredicted RBP18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 C4orf51C9J302 202 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 UQCRHP07919 91 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 CYC1P08574 325 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 ITGAMP11215 1152 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 SPRP35270 261 aaPredicted RBP18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 HNF4AP41235 474 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 GUCY2DQ02846 1103 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 GRTP1Q5TC63 336 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 SLCO4C1Q6ZQN7 724 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 CPEB2Q7Z5Q1 589 aaKnown RBP18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 ANKRD37Q7Z713 158 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 GPSM1Q86YR5 675 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 UTP15Q8TED0 518 aaKnown RBP18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 EXT2Q93063 718 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 IMMP1LQ96LU5 166 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 TUBB6Q9BUF5 446 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 SLC6A16Q9GZN6 736 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 LANCL2Q9NS86 450 aa18.84■□□□□ 0.61
SHCBP1-203ENST00000564272 ZDHHC18Q9NUE0 388 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms