RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 GAGE5Q13069 117 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 GAGE6Q13070 117 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 DMP1Q13316 513 aaPredicted RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 GIT2Q14161 759 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SOWAHCQ53LP3 525 aaPredicted RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF805Q5CZA5 627 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 RESP18Q5W5W9 173 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 PAPD4Q6PIY7 484 aaKnown RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 PET117Q6UWS5 81 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 CCDC73Q6ZRK6 1079 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 KCTD8Q6ZWB6 473 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SLC26A9Q7LBE3 791 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 GPBP1Q86WP2 473 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 TMPRSS12Q86WS5 348 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 METTL23Q86XA0 190 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 MAP7D3Q8IWC1 876 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 NUP93Q8N1F7 819 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ARL10Q8N8L6 244 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 COLGALT1Q8NBJ5 622 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 TMEM161BQ8NDZ6 487 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ACVR1CQ8NER5 493 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 APPL2Q8NEU8 664 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 GDAP1Q8TB36 358 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 LRRC8CQ8TDW0 803 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 DNAJC19Q96DA6 116 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 MRPL38Q96DV4 380 aaKnown RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 CPB2Q96IY4 423 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF583Q96ND8 569 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 DESI2Q9BSY9 194 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 KIFC3Q9BVG8 833 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 CUEDC2Q9H467 287 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ST6GALNAC4Q9H4F1 302 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 PDZD7Q9H5P4 517 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 TRPV4Q9HBA0 871 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SDF2L1Q9HCN8 221 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 POLD4Q9HCU8 107 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF334Q9HCZ1 680 aaPredicted RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ZFP57Q9NU63 452 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 TBC1D13Q9NVG8 400 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 OGFRQ9NZT2 677 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 TAAR2Q9P1P5 351 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 LARSQ9P2J5 1176 aaKnown RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 COPG2Q9UBF2 871 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 FBXL17Q9UF56 701 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 CFAP45Q9UL16 551 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 MTUS1Q9ULD2 1270 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 KIF26AQ9ULI4 1882 aaPredicted RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 MYO16Q9Y6X6 1858 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TTC28Q96AY4 2481 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 GTPBP10A4D1E9 387 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 CCDC169A6NNP5 214 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 FAM90A26D6RGX4 464 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 FAM72CH0Y354 149 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 H0YCG3 227 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 K7ERI5 159 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 SLC16A4O15374 487 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 BUD23O43709 281 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 PIGRP01833 764 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 ATP5BP06576 529 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TMEM11P17152 192 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 CAMPP49913 170 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TAS2R40P59535 323 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 NUCB2P80303 420 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 GTF2BQ00403 316 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 UBXN1Q04323 297 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 NCBP1Q09161 790 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 GPM6BQ13491 265 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 SNTB1Q13884 538 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 DCAF4L1Q3SXM0 396 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 KRBOX4Q5JUW0 171 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 OTUD3Q5T2D3 398 aaPredicted RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 FAM72AQ5TYM5 149 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 ATF7IP2Q5U623 682 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 PMS2CLQ68D20 193 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 OR7E24Q6IFN5 339 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 FAM72DQ6L9T8 149 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 C19orf48Q6RUI8 117 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 GLDNQ6ZMI3 551 aaPredicted RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 RAPH1Q70E73 1250 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 HAUS6Q7Z4H7 955 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 CDR2LQ86X02 465 aaPredicted RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 FAM72BQ86X60 149 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 UNC45BQ8IWX7 931 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 CNPY4Q8N129 248 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 SLC39A11Q8N1S5 342 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 MINDY1Q8N5J2 469 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 UTP15Q8TED0 518 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 PPP4R1Q8TF05 950 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TMEM255BQ8WV15 326 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 MOAP1Q96BY2 351 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 CITED2Q99967 270 aaPredicted RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TRMT61BQ9BVS5 477 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 TNMDQ9H2S6 317 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 NXF3Q9H4D5 531 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 MAGEF1Q9HAY2 307 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 PARVGQ9HBI0 331 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 OLFML3Q9NRN5 406 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 FAM118AQ9NWS6 357 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 PSD3Q9NYI0 1048 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms