RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 PCBD2Q9H0N5 130 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 KCNK13Q9HB14 408 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 PLAC1Q9HBJ0 212 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 LANCL2Q9NS86 450 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 TAS2R13Q9NYV9 303 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 SEC14L3Q9UDX4 400 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 C19orf25Q9UFG5 118 aaPredicted RBP10.96□□□□□ -0.65
USP3-220ENST00000561381 TEKT2Q9UIF3 430 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.65
USP3-220ENST00000561381 CTAGE15A4D2H0 777 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 ENO4A6NNW6 628 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 CCL21O00585 134 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 SLC16A5O15375 505 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 NRDCO43847 1150 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 CYC1P08574 325 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 CD96P40200 585 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 CA7P43166 264 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 FNTAP49354 379 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 AGTR2P50052 363 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 OLR1P78380 273 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 SP140Q13342 867 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 TUBA3CQ13748 450 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 ABRAXAS2Q15018 415 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 NSDHLQ15738 373 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 SFT2D3Q587I9 215 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 HP1BP3Q5SSJ5 553 aaPredicted RBP10.95□□□□□ -0.66
USP3-220ENST00000561381 CATSPEREQ5SY80 951 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 SPINK14Q6IE38 97 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 LRRC8EQ6NSJ5 796 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 TUBA3EQ6PEY2 450 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 PAPD4Q6PIY7 484 aaKnown RBP10.95□□□□□ -0.66
USP3-220ENST00000561381 LCTLQ6UWM7 567 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 CTAGE6Q86UF2 777 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 PALM2Q8IXS6 379 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 ZNF740Q8NDX6 193 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 MDS2Q8NDY4 140 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 ABHD11Q8NFV4 315 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 DNAJB8Q8NHS0 232 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 ZNF354BQ96LW1 612 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 OSBPL9Q96SU4 736 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 TSPAN10Q9H1Z9 355 aaPredicted RBP10.95□□□□□ -0.66
USP3-220ENST00000561381 SPNS1Q9H2V7 528 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 KLHL1Q9NR64 748 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 SLC22A7Q9Y694 548 aa10.95□□□□□ -0.66
USP3-220ENST00000561381 FAM227AF5H4B4 570 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 GPR37O15354 613 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 NDUFS4O43181 175 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 OR1F1O43749 312 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 SLC35G6P0C7Q6 338 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 CCND1P24385 295 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 GRK3P35626 688 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 CCR8P51685 355 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 ACTN3Q08043 901 aaPredicted RBP10.94□□□□□ -0.66
USP3-220ENST00000561381 USP10Q14694 798 aaKnown RBP10.94□□□□□ -0.66
USP3-220ENST00000561381 PPP1R7Q15435 360 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 OR1C1Q15619 314 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 EXT1Q16394 746 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 DEFB134Q4QY38 66 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 SPANXN3Q5MJ09 141 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 PCGF5Q86SE9 256 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 MRGPRGQ86SM5 289 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 CNTN4Q8IWV2 1026 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 SLC35F6Q8N357 371 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 KIF2BQ8N4N8 673 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 AFAP1L2Q8N4X5 818 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 GPATCH11Q8N954 259 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 PLPP5Q8NEB5 264 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 OR4K1Q8NGD4 311 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 OR56A3Q8NH54 315 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 M1APQ8TC57 530 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 ACTRT1Q8TDG2 376 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 GRK7Q8WTQ7 553 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 SNF8Q96H20 258 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 PWWP2AQ96N64 755 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 NAP1L3Q99457 506 aaPredicted RBP10.94□□□□□ -0.66
USP3-220ENST00000561381 OLFM1Q99784 485 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 WDR83Q9BRX9 315 aaKnown RBP10.94□□□□□ -0.66
USP3-220ENST00000561381 MMP25Q9NPA2 562 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 ARL15Q9NXU5 204 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 ASIC3Q9UHC3 531 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 TINAGQ9UJW2 476 aa10.94□□□□□ -0.66
USP3-220ENST00000561381 GOLGA6L10A0A0M3HER8 536 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 TRBC2A0A5B9 178 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 GABRR3A8MPY1 467 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 MAGEB17A8MXT2 336 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 DNALI1O14645 258 aaPredicted RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 ZNHIT1O43257 154 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 CHST10O43529 356 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 GALR3O60755 368 aaPredicted RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 SLC19A2O60779 497 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 B4GALT2O60909 372 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 TTC4O95801 387 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 GUCA1CO95843 209 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 SERPIND1P05546 499 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 HIST1H2AGP0C0S8 130 aaPredicted RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 ZNF888P0CJ79 500 aaPredicted RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 MYBL2P10244 700 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 HIST1H2ADP20671 130 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 OR4D2P58180 307 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 SLC26A5P58743 744 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms