RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 GSTM2P28161 218 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 PDHA2P29803 388 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 P2RY2P41231 377 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 VIPR2P41587 438 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 MAGEA8P43361 318 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 SLC6A11P48066 632 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 ARFIP1P53367 373 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 RPS13P62277 151 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 RUNX3Q13761 415 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 SLBPQ14493 270 aaKnown RBP eCLIP9.33□□□□□ -0.92
RTF1-206ENST00000560447 CCSMST1Q4G0I0 132 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 PRAMEF14Q5SWL7 426 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 ZNF648Q5T619 568 aaPredicted RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 PRAMEF13Q5VWM6 474 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 FAM71E1Q6IPT2 247 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 ZCCHC8Q6NZY4 707 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 PNCKQ6P2M8 343 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 DHRS4L2Q6PKH6 230 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 XKR5Q6UX68 686 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 ZNF621Q6ZSS3 439 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 CCDC80Q76M96 950 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 PAGE2Q7Z2X7 111 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 TRMT11Q7Z4G4 463 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 C11orf96Q7Z7L8 435 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 AMZ2Q86W34 360 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 DCP2Q8IU60 420 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 ZNF547Q8IVP9 402 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 FAM86B1Q8N7N1 296 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 C11orf65Q8NCR3 313 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 OR52N2Q8NGI0 321 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 FGF13Q92913 245 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 HLA-CQ95604 372 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 NMD3Q96D46 503 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 MPP4Q96JB8 637 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 MUS81Q96NY9 551 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 EPYCQ99645 322 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 RAB11FIP5Q9BXF6 653 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 EBPLQ9BY08 206 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 TRIT1Q9H3H1 467 aaKnown RBP9.33□□□□□ -0.92
RTF1-206ENST00000560447 TOR3AQ9H497 397 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 MTG2Q9H4K7 406 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 TMEM38AQ9H6F2 299 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 WASH6PQ9NQA3 447 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 PRSS16Q9NQE7 514 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 ADAM29Q9UKF5 820 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 ITM2BQ9Y287 266 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 PADI2Q9Y2J8 665 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 V9GYQ6 96 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 BRCA2P51587 3418 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 MYOCOSA0A1B0GUC4 107 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 LOC100130705A0A1B0GUX0 176 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 GNG14A0A1W2PPG7 69 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 H3BSA7 217 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 M0QX08 132 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 CACNB4O00305 520 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 NOL3O60936 208 aaKnown RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 ETHE1O95571 254 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 CPSF4O95639 269 aaKnown RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 IFNA14P01570 189 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 MT-ND1P03886 318 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 APODP05090 189 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 GSNP06396 782 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 FURINP09958 794 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 MYCLP1P12525 358 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 ZNF8P17098 575 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 C5AR1P21730 350 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 FCARP24071 287 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 PBLDP30039 288 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 SLC5A2P31639 672 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 OPRD1P41143 372 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TMBIM6P55061 237 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TPD52P55327 224 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 TRA2BP62995 288 aaKnown RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 CSNK2BP67870 215 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TEKQ02763 1124 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 KCNAB2Q13303 367 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 DDX39BQ13838 428 aaKnown RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 STARD3Q14849 445 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 RGNQ15493 299 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 ZNF630Q2M218 657 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 HKDC1Q2TB90 917 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 C6orf141Q5SZD1 244 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 PIP5KL1Q5T9C9 394 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 ZNF691Q5VV52 312 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 METRNLQ641Q3 311 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TRIM40Q6P9F5 258 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 SPESP1Q6UW49 350 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TMIGD1Q6UXZ0 262 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TMEM184AQ6ZMB5 413 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 EP400NLQ6ZTU2 488 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 COMMD6Q7Z4G1 85 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 ANKRD46Q86W74 232 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 C17orf64Q86WR6 236 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 FAM129CQ86XR2 697 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 LILRA3Q8N6C8 439 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms