RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CD3EP07766 207 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 GNAI3P08754 354 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A15PP0C7V4 464 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A14PP0C7W9 464 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DBTP11182 482 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 COX4I1P13073 169 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DAOP14920 347 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 IFNGR1P15260 489 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACO1P21399 889 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CNR1P21554 472 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 KLRC1P26715 233 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DPP4P27487 766 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RBL1P28749 1068 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 IL12BP29460 328 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 OXTRP30559 389 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAS1LP35410 378 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MC3RP41968 323 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRCPP42785 496 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAGEB1P43366 347 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 YAP1P46937 504 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 NPY2RP49146 381 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SRP9P49458 86 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CSNK1EP49674 416 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CXCR3P49682 368 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DGKEP52429 567 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF135P52742 658 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CDH15P55291 814 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTBP60709 375 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTA2P62736 377 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTG1P63261 375 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTG2P63267 376 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTC1P68032 377 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTA1P68133 377 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MXRA7P84157 204 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 EFNB1P98172 346 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 HSF2Q03933 536 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 C2orf54Q08AI8 447 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM115Q12893 351 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PPP1R8Q12972 351 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 BAMBIQ13145 260 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC13A2Q13183 592 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 EIF4EBP2Q13542 120 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 GRAPQ13588 217 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RAB32Q13637 225 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 HNF4GQ14541 408 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNHIT3Q15649 155 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TOMM34Q15785 309 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PCK2Q16822 640 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CDO1Q16878 200 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TATDN3Q17R31 274 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DPCR1Q3MIW9 517 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CATSPEREQ5SY80 951 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SPOUT1Q5T280 376 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 C6orf183Q5T699 404 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 GPR157Q5UAW9 335 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 HACD4Q5VWC8 232 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 BSPRYQ5W0U4 402 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MBLAC2Q68D91 279 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 C11orf63Q6NUN7 778 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 C5orf46Q6UWT4 87 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 GDPD4Q6W3E5 623 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CERS6Q6ZMG9 384 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PGAP1Q75T13 922 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RRM2BQ7LG56 351 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ABI3BPQ7Z7G0 1075 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLCO6A1Q86UG4 719 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF280BQ86YH2 543 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RHOT1Q8IXI2 618 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 YAF2Q8IY57 180 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RNF113BQ8IZP6 322 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RNF148Q8N7C7 305 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TERB1Q8NA31 727 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACBD4Q8NC06 268 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM116Q8NCL8 245 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CCDC197Q8NCU1 140 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF248Q8NDW4 579 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ABHD11Q8NFV4 315 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PHYHIPQ92561 330 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 LPGAT1Q92604 370 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SMARCD2Q92925 531 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TOP1MTQ969P6 601 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF707Q96C28 371 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 NXPE2Q96DL1 559 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DAZAP1Q96EP5 407 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM176AQ96HP8 235 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MRGPRX4Q96LA9 322 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SPATA13Q96N96 652 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RILPQ96NA2 401 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 QKIQ96PU8 341 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TEAD3Q99594 435 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ASCL2Q99929 193 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAPKAP1Q9BPZ7 522 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM47Q9BQJ4 181 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PELOQ9BRX2 385 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 WDR83Q9BRX9 315 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MYL10Q9BUA6 226 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ADI1Q9BV57 179 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMED9Q9BVK6 235 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 P2RY12Q9H244 342 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms