RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 DENND5AQ6IQ26 1287 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 ISOC1Q96CN7 298 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 NODALQ96S42 347 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC39A3Q9BRY0 314 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 ADAP2Q9NPF8 381 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 MARK1Q9P0L2 795 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 DUSP12Q9UNI6 340 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 MAP4K5Q9Y4K4 846 aa10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 COPG1Q9Y678 874 aaKnown RBP10.29□□□□□ -0.76
CARMIL3-202ENST00000559694 B4GALT2O60909 372 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 CLIC3O95833 236 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 EBLN1P0CF75 366 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 LIPEQ05469 1076 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PCLAFQ15004 111 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 MOGQ16653 247 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 WSCD2Q2TBF2 565 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 KIAA0895LQ68EN5 471 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 EPGNQ6UW88 154 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 OR5AR1Q8NGP9 310 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 CITED4Q96RK1 184 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 AKTIPQ9H8T0 292 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 TREX1Q9NSU2 369 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ANGPT4Q9Y264 503 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ZNF860A6NHJ4 632 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 DENRO43583 198 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 UMPSP11172 480 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 VSX2P58304 361 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 CTBSQ01459 385 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 HYAL2Q12891 473 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 TOR1AIP1Q5JTV8 583 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ZNF678Q5SXM1 525 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 MACC1Q6ZN28 852 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ABHD13Q7L211 337 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 CDH24Q86UP0 819 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 RHEBL1Q8TAI7 183 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PRR23D1E9PI22 279 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC22A2O15244 555 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 DUX1O43812 170 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 SORBS2O94875 1100 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PRR23D2P0DMB1 279 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 FGF3P11487 239 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PPIBP23284 216 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ACADVLP49748 655 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 TBPL1P62380 186 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ERVK-8P63133 956 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PTSQ03393 145 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 KCTD11Q693B1 232 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 GATAD2AQ86YP4 633 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 EDAQ92838 391 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PLA2G2FQ9BZM2 168 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ALG2Q9H553 416 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 EXO5Q9H790 373 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 ZNF696Q9H7X3 374 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 CD320Q9NPF0 282 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 IFT80Q9P2H3 777 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 PDE10AQ9Y233 779 aa10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 WBP11Q9Y2W2 641 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-202ENST00000559694 FAM221BA6H8Z2 402 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 MANBAO00462 879 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 FADS2O95864 444 aaKnown RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 IL9P15248 144 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 PORP16435 677 aaPredicted RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 CLK3P49761 638 aaKnown RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 RAB28P51157 221 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC14A2Q15849 920 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 ZFP69Q49AA0 526 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 OGFRL1Q5TC84 451 aaPredicted RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 TRIQKQ629K1 86 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 FAM160A2Q8N612 972 aaPredicted RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 MKRN2Q9H000 416 aaKnown RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 RSPH9Q9H1X1 276 aaPredicted RBP10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 PDE7BQ9NP56 450 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 SARDHQ9UL12 918 aa10.27□□□□□ -0.76
CARMIL3-202ENST00000559694 ZNF646O15015 1829 aaPredicted RBP10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 HTRA2O43464 458 aaPredicted RBP10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 NARSO43776 548 aaKnown RBP10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 KCNJ13O60928 360 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 SERPINB7O75635 380 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 MATN4O95460 622 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 C1GALT1C1LP0DN25 315 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 CDK4P11802 303 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 NUDT1P36639 197 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 MMP12P39900 470 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 TRAP1Q12931 704 aaKnown RBP10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 OR4D1Q15615 310 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 FAM214AQ32MH5 1076 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 TNFAIP8L3Q5GJ75 292 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 ARHGAP40Q5TG30 622 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 NIPAL1Q6NVV3 410 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 NEK5Q6P3R8 708 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 KLHL17Q6TDP4 642 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 BHLHA9Q7RTU4 235 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 ZNF605Q86T29 641 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 ISCA2Q86U28 154 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 PROSER1Q86XN7 944 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 UBALD2Q8IYN6 164 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 KDM1BQ8NB78 822 aa10.27□□□□□ -0.77
CARMIL3-202ENST00000559694 KBTBD8Q8NFY9 601 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms