RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PPP6CO00743 305 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 NKX2-8O15522 239 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 SPAG7O75391 227 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 IMPDH1P20839 514 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 PIK3CGP48736 1102 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 CDH13P55290 713 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 HERVK_113P63132 956 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 CXADRP78310 365 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 NCF4Q15080 339 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 HIST2H2ACQ16777 129 aaPredicted RBP19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 TNFAIP8L3Q5GJ75 292 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 PAGE2BQ5JRK9 111 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ZNF678Q5SXM1 525 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 FAM69BQ5VUD6 431 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 LIPJQ5W064 366 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 HIST2H2AA3Q6FI13 130 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ADNP2Q6IQ32 1131 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ZYG11AQ6WRX3 759 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 TMEM151BQ8IW70 566 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 TTLQ8NG68 377 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ZCCHC10Q8TBK6 192 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 SNRNP27Q8WVK2 155 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 STARD8Q92502 1023 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 MVB12AQ96EY5 273 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 APOPT1Q96IL0 206 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ERVK-6Q9BXR3 956 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 SLC6A16Q9GZN6 736 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 DRC3Q9H069 523 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 RHBGQ9H310 441 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 KLHL31Q9H511 634 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ACTL8Q9H568 366 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 CDC14AQ9UNH5 594 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 RNF11Q9Y3C5 154 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 ANKDD1BA6NHY2 528 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 CREG1O75629 220 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 TBX6O95947 436 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SERPINA6P08185 405 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SMIM10L1P0DMW3 83 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 MYL2P10916 166 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 PIM1P11309 404 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 TSPAN8P19075 237 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 FOXL2P58012 376 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 RGS1Q08116 209 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 GRHL2Q6ISB3 625 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 MED27Q6P2C8 311 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SLC22A9Q8IVM8 553 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 LAS2Q8IYD9 372 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 AFAP1L2Q8N4X5 818 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 L3MBTL4Q8NA19 623 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 OR52B6Q8NGF0 335 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 OR9A4Q8NGU2 314 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 COL26A1Q96A83 441 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 MMABQ96EY8 250 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SMIM10Q96HG1 83 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 TMEM237Q96Q45 408 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SMC6Q96SB8 1091 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 C17orf62Q9BQA9 187 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 NTMT1Q9BV86 223 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 FAM117AQ9C073 453 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 ACTR8Q9H981 624 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SEMA4BQ9NPR2 832 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 GPN3Q9UHW5 284 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 SLC22A7Q9Y694 548 aa19.26■□□□□ 0.67
TSPAN3-207ENST00000559494 UGDHO60701 494 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CLEC3AO75596 197 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 KLF7O75840 302 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 SUPT7LO94864 414 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 B3GALT4O96024 378 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CPA3P15088 417 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 IL1RNP18510 177 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 HNF4AP41235 474 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 TRAF3Q13114 568 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CROCCP2Q86T23 111 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 EXOC3L1Q86VI1 746 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 PDSS2Q86YH6 399 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 SHISA5Q8N114 240 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 AMER3Q8N944 861 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ZSCAN1Q8NBB4 408 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 OR7G3Q8NG95 312 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 UTP15Q8TED0 518 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ATP6V1E2Q96A05 226 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 FKBP10Q96AY3 582 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 L3HYPDHQ96EM0 354 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 SEC16BQ96JE7 1060 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CDK15Q96Q40 435 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CENPHQ9H3R5 247 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 SLC17A7Q9P2U7 560 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 TCFL5Q9UL49 500 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CACNA1GO43497 2377 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ITPR1Q14643 2758 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 A0A1B0GTL3 188 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ZNF891A8MT65 544 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 TYROBPO43914 113 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 NSA2O95478 260 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CLDN9O95484 217 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ALBP02768 609 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 FURINP09958 794 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 FBLP22087 321 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 GSTM2P28161 218 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CCNG1P51959 295 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms