RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 FDCSPQ8NFU4 85 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 OR4K1Q8NGD4 311 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 OR9A4Q8NGU2 314 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 OR51Q1Q8NH59 317 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 NT5CQ8TCD5 201 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 SLC44A1Q8WWI5 657 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNX1-205ENST00000559339 CCT6BQ92526 530 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 EXT2Q93063 718 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 UBE2E3Q969T4 207 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 MTBPQ96DY7 904 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 TM4SF19Q96DZ7 209 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 PTCD3Q96EY7 689 aaKnown RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 FAR2Q96K12 515 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 AGAP4Q96P64 663 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 OR4K3Q96R72 315 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 OR1F2PQ96R84 312 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 PAFAH2Q99487 392 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 SPSB2Q99619 263 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 RHOXF2Q9BQY4 288 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 CENPKQ9BS16 269 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 EFCAB11Q9BUY7 163 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 TRIM55Q9BYV6 548 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 CD244Q9BZW8 370 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 UNKQ9C0B0 810 aaKnown RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 TGIF2Q9GZN2 237 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 VPS11Q9H270 941 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 CDC42EP4Q9H3Q1 356 aaKnown RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 EHD1Q9H4M9 534 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 EPS8L2Q9H6S3 715 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 ALG9Q9H6U8 611 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 PELI2Q9HAT8 420 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 CLK4Q9HAZ1 481 aaKnown RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 SLAMF7Q9NQ25 335 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 SNX15Q9NRS6 342 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 SLC22A11Q9NSA0 550 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 DNAJC11Q9NVH1 559 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 NINJ2Q9NZG7 142 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 NUDT4Q9NZJ9 180 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 C5AR2Q9P296 337 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 OPTCQ9UBM4 332 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 TEKT2Q9UIF3 430 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 ZNF180Q9UJW8 692 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 FBXL4Q9UKA2 621 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 PTBP2Q9UKA9 531 aaKnown RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 IKZF3Q9UKT9 509 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 NFU1Q9UMS0 254 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 NAALAD2Q9Y3Q0 740 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 TNPO3Q9Y5L0 923 aaKnown RBP4.15□□□□□ -1.75
SNX1-205ENST00000559339 COL6A6A6NMZ7 2263 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 BOD1L1Q8NFC6 3051 aa4.15□□□□□ -1.75
SNX1-205ENST00000559339 IQANK1A0A1B0GTG1 560 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 DYTNA2CJ06 578 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SYNDIG1LA6NDD5 238 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TTLL8A6PVC2 850 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 POC1B-GALNT4F8VUJ3 575 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 K7EPI3 171 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SGK494L7N484 410 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 CLDN4O14493 209 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SOCS6O14544 535 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 P2RX6O15547 441 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 RIPK2O43353 540 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 LCMT2O60294 686 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 CNOT3O75175 753 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 CEACAM4O75871 244 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KLHL18O94889 574 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 WISP3O95389 354 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 BMP10O95393 424 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 HPP00738 406 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 C1QAP02745 245 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 STATHP02808 62 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ALDOAP04075 364 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 C2P06681 752 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 UMODP07911 640 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ABHD2P08910 425 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SNRPAP09012 282 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 ZNF888P0CJ79 500 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 SPTBP11277 2137 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 COL6A2P12110 1019 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 PLA2G2AP14555 144 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ALOX12P18054 663 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SERPINB1P30740 379 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ARL1P40616 181 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 HNF4AP41235 474 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SLC6A12P48065 614 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 GLRBP48167 497 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KCNC1P48547 511 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 PIK3CGP48736 1102 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 HSPA7P48741 367 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ALDH18A1P54886 795 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 SOX8P57073 446 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 BTN3A2P78410 334 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 PHEXP78562 749 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 MAT1AQ00266 395 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 REEP5Q00765 189 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 IRF8Q02556 426 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KCNC4Q03721 635 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TLE1Q04724 770 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 RAPSNQ13702 412 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms