RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 E5RI56 91 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 E7ENX8 843 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 NIPSNAP2O75323 286 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 TRHRP34981 398 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 SNRPNP63162 240 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 MPP1Q00013 466 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 TAP2Q03519 686 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 CMPK2Q5EBM0 449 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 PCID2Q5JVF3 399 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 CTSL3PQ5NE16 218 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 MRNIPQ6NTE8 343 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 TMEM214Q6NUQ4 689 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 BIVMQ86UB2 503 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 ZZZ3Q8IYH5 903 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 RPRMLQ8N4K4 120 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 TMEM156Q8N614 296 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 ZNF480Q8WV37 535 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 ALPK1Q96QP1 1244 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 MACROD1Q9BQ69 325 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 DEFB126Q9BYW3 111 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 NAALAD2Q9Y3Q0 740 aa16.69■□□□□ 0.26
TSPAN3-204ENST00000558394 KCNE1BA0A087WTH5 132 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ESR1P03372 595 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 JAK1P23458 1154 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 STIP1P31948 543 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ZFP36L2P47974 494 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 SKP1P63208 163 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 GBX1Q14549 363 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ACSBG2Q5FVE4 666 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 RNF187Q5TA31 235 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ARSKQ6UWY0 536 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 VN1R4Q7Z5H5 301 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ZNF227Q86WZ6 799 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 SHISA5Q8N114 240 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 CYP4Z2PQ8N1L4 340 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ALG3Q92685 438 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 GPATCH1Q9BRR8 931 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 DEFB127Q9H1M4 99 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 LIME1Q9H400 295 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 DLL4Q9NR61 685 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 RPH3AQ9Y2J0 694 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 L3MBTL1Q9Y468 752 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 ZNF407Q9C0G0 2248 aa16.68■□□□□ 0.26
TSPAN3-204ENST00000558394 NPIPA2E9PIF3 369 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 NPIPA3F8WFD2 350 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 IFNB1P01574 187 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 APRTP07741 180 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 FHP07954 510 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 SLC35G6P0C7Q6 338 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 GRK3P35626 688 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 SESN2P58004 480 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 GPR85P60893 370 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 MEF2AQ02078 507 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 PLGLB1Q02325 96 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 TTLL9Q3SXZ7 439 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 CAMKMTQ7Z624 323 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 ASPGQ86U10 573 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 UBL4BQ8N7F7 174 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 ZFP62Q8NB50 900 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 KCT2Q8NC54 265 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 OR52N2Q8NGI0 321 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 SLC35B2Q8TB61 432 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 SLC13A3Q8WWT9 602 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 TBC1D20Q96BZ9 403 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 PWWP2AQ96N64 755 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 BIRC8Q96P09 236 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 FAM129AQ9BZQ8 928 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 RAB6BQ9NRW1 208 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 LANCL2Q9NS86 450 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 ZNF358Q9NW07 568 aa16.67■□□□□ 0.26
TSPAN3-204ENST00000558394 ZNF860A6NHJ4 632 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 FIGNL2A6NMB9 653 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 ACOT7O00154 380 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 PROM1O43490 865 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 ZBTB14O43829 449 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 FLNAP21333 2647 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 ACVR2AP27037 513 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 KIR2DL3P43628 341 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 ADAM8P78325 824 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 HERC3Q15034 1050 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 ZNF585AQ6P3V2 769 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 PDSS2Q86YH6 399 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 REXO1L1PQ8IX06 675 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 CREB3L4Q8TEY5 395 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 PTCHD1Q96NR3 888 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 TIMMDC1Q9NPL8 285 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 CCDC177Q9NQR7 707 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 CRYL1Q9Y2S2 319 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 FBN3Q75N90 2809 aa16.66■□□□□ 0.26
TSPAN3-204ENST00000558394 SAGE2PA6NJ88 616 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 B4GALT2O60909 372 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 TUBB4AP04350 444 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 ADSLP30566 484 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 CYLC1P35663 651 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 PEX19P40855 299 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 KCNJ11Q14654 390 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 GXYLT1Q4G148 440 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms