RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM1-209ENST00000558072 GPR135Q8IZ08 494 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 D2HGDHQ8N465 521 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 DNAJC22Q8N4W6 341 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 FNDC5Q8NAU1 212 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 C7orf57Q8NEG2 295 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 RFWD2Q8NHY2 731 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 C10orf82Q8WW14 230 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 KCNC2Q96PR1 638 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 OR2A5Q96R48 311 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 MTERF1Q99551 399 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 TBCDQ9BTW9 1192 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ENAMQ9NRM1 1142 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ASIC5Q9NY37 505 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 NOP53Q9NZM5 478 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 TMEM9Q9P0T7 183 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 PILRAQ9UKJ1 303 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ATXN7L1Q9ULK2 861 aaPredicted RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 SH2B3Q9UQQ2 575 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 A0A1B0GTL3 188 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 FEZF1A0PJY2 475 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 D6RAR5 112 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 LSM1O15116 133 aaKnown RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 NDUFS4O43181 175 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 SERPIND1P05546 499 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 HBQ1P09105 142 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 THRAP10827 490 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 EPHA3P29320 983 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 CSF2RBP32927 897 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 RPL3P39023 403 aaKnown RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 BCL6P41182 706 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ASMTP46597 345 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ATP4BP51164 291 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ARSFP54793 590 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 GFERP55789 205 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 RPS13P62277 151 aaKnown RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 MEF2AQ02078 507 aaPredicted RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 GRM7Q14831 915 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 HERC3Q15034 1050 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 TERF2Q15554 542 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ZIC1Q15915 447 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ATG14Q6ZNE5 492 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 Q6ZSR9 355 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 TMPRSS9Q7Z410 1059 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ARHGAP22Q7Z5H3 698 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 CACTIN-AS1Q8N1I8 211 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 TTC29Q8NA56 475 aaPredicted RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 AGBL5Q8NDL9 886 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 GAL3ST3Q96A11 431 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 MTFMTQ96DP5 389 aaKnown RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 TM4SF19Q96DZ7 209 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 FCRL4Q96PJ5 515 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 MS4A8Q9BY19 250 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 ACPTQ9BZG2 426 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 REXO4Q9GZR2 422 aaKnown RBP11.85□□□□□ -0.51
TPM1-209ENST00000558072 KLHL25Q9H0H3 589 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 KCNK13Q9HB14 408 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 TNFRSF12AQ9NP84 129 aa11.85□□□□□ -0.51
TPM1-209ENST00000558072 HEATR5BQ9P2D3 2071 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 IGHV5-51A0A0C4DH38 117 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 LRIT2A6NDA9 550 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 H0YGG7 62 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 LCMT2O60294 686 aaKnown RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 NRP2O60462 931 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 PEX11AO75192 247 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 TGFB1P01137 390 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 PRR35P0CG20 571 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 NCF2P19878 526 aaPredicted RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 CCKBRP32239 447 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 MRPL19P49406 292 aaKnown RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 HTR6P50406 440 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 NEK2P51955 445 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 ARF3P61204 181 aaPredicted RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 TRA2BP62995 288 aaKnown RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 CFHR1Q03591 330 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 EIF3IQ13347 325 aaKnown RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 IL11RAQ14626 422 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 MAPRE2Q15555 327 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 ADPRMQ3LIE5 342 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 LSM12Q3MHD2 195 aaKnown RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 SLC9B1Q4ZJI4 515 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 C6orf136Q5SQH8 315 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 GALNT18Q6P9A2 607 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 NUDT13Q86X67 352 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 MARCH9Q86YJ5 346 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 METTL4Q8N3J2 472 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 ANKRD53Q8N9V6 530 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 ZNF740Q8NDX6 193 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 OR2L5Q8NG80 312 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 CREB3L4Q8TEY5 395 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms