RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TGM3Q08188 693 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 RPS6KA2Q15349 733 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 RFTN2Q52LD8 501 aaPredicted RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 SNAP47Q5SQN1 464 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 MANEAQ5SRI9 462 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 TMTC4Q5T4D3 741 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 FAM9CQ8IZT9 166 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 CPSF7Q8N684 471 aaKnown RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 SRFBP1Q8NEF9 429 aaKnown RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 NT5CQ8TCD5 201 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 CHTF18Q8WVB6 975 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 RGMAQ96B86 450 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 ERP27Q96DN0 273 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 APIPQ96GX9 242 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 C1orf50Q9BV19 199 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 REXO4Q9GZR2 422 aaKnown RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 MYLK2Q9H1R3 596 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 SAR1AQ9NR31 198 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 AIG1Q9NVV5 245 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 G3BP2Q9UN86 482 aaKnown RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 LRIT2A6NDA9 550 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 H0YGG7 62 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 TXNDC9O14530 226 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 SLC22A2O15244 555 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 SRPX2O60687 465 aaPredicted RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 PRAMEF10O60809 474 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 SH3BGRLO75368 114 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 ALDOCP09972 364 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 ANKRD34CP0C6C1 535 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 PRPS2P11908 318 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 ARFIP1P53367 373 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 ARF3P61204 181 aaPredicted RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 TBL3Q12788 808 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 SPIDRQ14159 915 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 KIAA0040Q15053 153 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 IL23RQ5VWK5 629 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 PAGE2Q7Z2X7 111 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 VN1R4Q7Z5H5 301 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 CLNKQ7Z7G1 428 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 MCATQ8IVS2 390 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 METTL4Q8N3J2 472 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 C1orf52Q8N6N3 182 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 N4BP2L2Q92802 583 aaPredicted RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 TM4SF19Q96DZ7 209 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 MARK4Q96L34 752 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 QRFPRQ96P65 431 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 FCRL4Q96PJ5 515 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 MRPL1Q9BYD6 325 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 ZNF768Q9H5H4 540 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 FAM60AQ9NP50 221 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 SIRT5Q9NXA8 310 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 TMEM9Q9P0T7 183 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 ATXN7L1Q9ULK2 861 aaPredicted RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 PLCL2Q9UPR0 1127 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 POLR3HQ9Y535 204 aaPredicted RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 COPG1Q9Y678 874 aaKnown RBP16.1■□□□□ 0.17
SNX1-203ENST00000558040 CAPN7Q9Y6W3 813 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 GPR179Q6PRD1 2367 aa16.1■□□□□ 0.17
SNX1-203ENST00000558040 CCT8L1PA6NM43 557 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 ZSCAN9O15535 394 aaPredicted RBP16.09■□□□□ 0.17
SNX1-203ENST00000558040 CBFA2T3O75081 653 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 MRPL19P49406 292 aaKnown RBP16.09■□□□□ 0.17
SNX1-203ENST00000558040 ACADVLP49748 655 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 ILKQ13418 452 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 ADPRMQ3LIE5 342 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 TOR1AIP1Q5JTV8 583 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 FAM91A1Q658Y4 838 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 FRMPD2BQ6IN97 320 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 NOXRED1Q6NXP6 359 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 TRIM40Q6P9F5 258 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 MIER2Q8N344 545 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 FITM2Q8N6M3 262 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 CSNK1A1LQ8N752 337 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 OR2L5Q8NG80 312 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 KLHL6Q8WZ60 621 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 GAL3ST3Q96A11 431 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 SLC41A2Q96JW4 573 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 FCRL1Q96LA6 429 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 F2RL3Q96RI0 385 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 BRINP2Q9C0B6 783 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 SLC6A16Q9GZN6 736 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 ZNF385DQ9H6B1 395 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 PDP2Q9P2J9 529 aa16.09■□□□□ 0.17
SNX1-203ENST00000558040 LOC105369274A0A096LPK9 316 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 LOC102723532A0A0G2JNH3 316 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 D6RAR5 112 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 SAP18O00422 153 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 NTN3O00634 580 aaPredicted RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 PLPP1O14494 284 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 TBX6O95947 436 aaPredicted RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 EIF2S1P05198 315 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 THRAP10827 490 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 NELFEP18615 380 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 TIA1P31483 386 aaKnown RBP eCLIP16.08■□□□□ 0.169e-6■□□□□ 8.2
SNX1-203ENST00000558040 HNRNPH1P31943 449 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 TSFMP43897 325 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 SEPHS1P49903 392 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 DIO3P55073 304 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms