RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, human

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-233	ENST00000557529	AASDH	Q4L235	1098 aa	Predicted RBP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	RABL3	Q5HYI8	236 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	ANXA8L1	Q5VT79	327 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	KIAA1614	Q5VZ46	1190 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	NUDT13	Q86X67	352 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	DHFR2	Q86XF0	187 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	NAGS	Q8N159	534 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	TMEM132C	Q8N3T6	1108 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	FBXL6	Q8N531	539 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	MFSD9	Q8NBP5	474 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	FAM156A	Q8NDB6	213 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	FAM46D	Q8NEK8	389 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR7A2P	Q8NGA2	310 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	WDR48	Q8TAF3	677 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	SLC37A2	Q8TED4	501 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	C16orf78	Q8WTQ4	265 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZDHHC1	Q8WTX9	485 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	GFM2	Q969S9	779 aa	Known RBP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZUFSP	Q96AP4	578 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	COQ8B	Q96D53	544 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	MTERF3	Q96E29	417 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	RSRC1	Q96IZ7	334 aa	Known RBP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	LRGUK	Q96M69	825 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	ANKRD27	Q96NW4	1050 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	GBP5	Q96PP8	586 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	DUSP26	Q9BV47	211 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	REXO4	Q9GZR2	422 aa	Known RBP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	ALG2	Q9H553	416 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	REEP4	Q9H6H4	257 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	SERHL	Q9NQF3	203 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	ATAD3A	Q9NVI7	634 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	AP1M2	Q9Y6Q5	423 aa		11.94	□□□□□ -0.5
SHMT2-233	ENST00000557529	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR6C74	A6NCV1	312 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	GABRR3	A8MPY1	467 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	C2orf74	A8MZ97	194 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PLPP1	O14494	284 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	RFXANK	O14593	260 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	HAT1	O14929	419 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	VILL	O15195	856 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	CAPN5	O15484	640 aa	Predicted RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZW10	O43264	779 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	TNFSF14	O43557	240 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	LCMT2	O60294	686 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	KLK1	P06870	262 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	ANPEP	P15144	967 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	UGT2B7	P16662	529 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	BCKDHB	P21953	392 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	HTR1E	P28566	365 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	BCL6	P41182	706 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	C21orf59	P57076	290 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	RPS15A	P62244	130 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PLIN5	Q00G26	463 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	CYP4F3	Q08477	520 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	SIGLEC14	Q08ET2	396 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PDE7A	Q13946	482 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZIC1	Q15915	447 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	SLC5A12	Q1EHB4	618 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	RUNDC3A	Q59EK9	446 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	CCNYL2	Q5T2Q4	361 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR4F3	Q6IEY1	312 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	TMEM26	Q6ZUK4	368 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	SPATA24	Q86W54	205 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PAQR7	Q86WK9	346 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PTRH1	Q86Y79	214 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	TMEFF1	Q8IYR6	380 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	GOLM1	Q8NBJ4	401 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	TNIP2	Q8NFZ5	429 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	C1orf216	Q8TAB5	229 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	CREB3L4	Q8TEY5	395 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PYDC1	Q8WXC3	89 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR2A14	Q96R47	310 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	F2RL3	Q96RI0	385 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PAIP1	Q9H074	479 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PCDHAC1	Q9H158	963 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	ACTR10	Q9NZ32	417 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	VAPA	Q9P0L0	249 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	DLGAP2	Q9P1A6	1054 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	ACTR3B	Q9P1U1	418 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	BTNL2	Q9UIR0	455 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	DOLK	Q9UPQ8	538 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	PCDHGA4	Q9Y5G9	962 aa		11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-233	ENST00000557529	TRBV5-3	A0A0A0MS03	114 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	PRSS51	A0A1B0GVH4	220 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	GSAP	A4D1B5	854 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	AQP12B	A6NM10	295 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	DFNA5	O60443	496 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	ANP32D	O95626	131 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	TBX6	O95947	436 aa	Predicted RBP	11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	C8B	P07358	591 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	LAMP1	P11279	417 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	TPP2	P29144	1249 aa	Predicted RBP	11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	BSG	P35613	385 aa		11.92	□□□□□ -0.5
SHMT2-233	ENST00000557529	GRIA3	P42263	894 aa		11.92	□□□□□ -0.5

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