RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DNAJA2O60884 412 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 B3GALT4O96024 378 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 EIF2S1P05198 315 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 TPH1P17752 444 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 FBLP22087 321 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PSMB5P28074 263 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 SLC1A1P43005 524 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ATP5OP48047 213 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 MARCKSL1P49006 195 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 EFNA3P52797 238 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ART1P52961 327 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 EMP2P54851 167 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 UBASH3AP57075 661 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PLOD1Q02809 727 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF33BQ06732 778 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PCDH1Q08174 1060 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 IQCB1Q15051 598 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PCOLCEQ15113 449 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 SF1Q15637 639 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 CCDC38Q502W7 563 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF766Q5HY98 468 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 WIPI1Q5MNZ9 446 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ANKRD20A2Q5SQ80 823 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ANKRD20A1Q5TYW2 823 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ABHD17BQ5VST6 288 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ANKRD20A3Q5VUR7 823 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PRMT9Q6P2P2 845 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 DARS2Q6PI48 645 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 C3P1Q6ZMU1 363 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 MEX3BQ6ZN04 569 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 Q6ZPB1 254 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 BBS12Q6ZW61 710 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 DCUN1D3Q8IWE4 304 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 RHOT2Q8IXI1 618 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 SLC22A15Q8IZD6 547 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 MMP21Q8N119 569 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 AGGF1Q8N302 714 aaeCLIP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 OR2C3Q8N628 320 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 OR2L8Q8NGY9 312 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 CFAP61Q8NHU2 1237 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 SLC22A18Q96BI1 424 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 IQCDQ96DY2 449 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 CDKN2AIPNLQ96HQ2 116 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 UBXN10Q96LJ8 280 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 GPR137Q96N19 417 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 MYCBPQ99417 103 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 MIPEPQ99797 713 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 TREX2Q9BQ50 279 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 NUDT16L1Q9BRJ7 211 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 TMEM121Q9BTD3 319 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 HEMGNQ9BXL5 484 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 HES7Q9BYE0 225 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ENKD1Q9H0I2 346 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 GOLPH3Q9H4A6 298 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 SPTLC3Q9NUV7 552 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PIH1D1Q9NWS0 290 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 STMN3Q9NZ72 180 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 TRPC4Q9UBN4 977 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ZC3H7BQ9UGR2 993 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 AAR2Q9Y312 384 aaKnown RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 FAM169AQ9Y6X4 670 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF469Q96JG9 3925 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 LOC102723996A0A087X1L8 192 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MACROD2A1Z1Q3 448 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 PABPN1LA6NDY0 278 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 TARM1B6A8C7 271 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 NPIPA5E9PKD4 350 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 APOC4-APOC2K7ER74 178 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 QSOX1O00391 747 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 ADAM10O14672 748 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 RASGRF2O14827 1237 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 FANCGO15287 622 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 TBX1O43435 398 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 AKR1B10O60218 316 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 PLOD3O60568 738 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 SRPX2O60687 465 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 APOC2P02655 101 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 RPN2P04844 631 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 HEXBP07686 556 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 HNRNPCP07910 306 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 OR56A5P0C7T3 313 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 CD99P14209 185 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 CXCR2P25025 360 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 CCR7P32248 378 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 FOXN2P32314 431 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 KRT20P35900 424 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 YBX1P67809 324 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 HSF1Q00613 529 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 HSPA14Q0VDF9 509 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 PRPSAP1Q14558 356 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 ITIH4Q14624 930 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 POU6F1Q14863 301 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MUM1Q2TAK8 710 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 PRTGQ2VWP7 1150 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 KRTCAP3Q53RY4 240 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 TMEM201Q5SNT2 666 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 FCRLBQ6BAA4 426 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 RNF44Q7L0R7 432 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms