RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 RAB17Q9H0T7 212 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF552Q9H707 407 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 ANKHQ9HCJ1 492 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 AGPAT4Q9NRZ5 378 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 C19orf25Q9UFG5 118 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 TEKT2Q9UIF3 430 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 ADAMTS6Q9UKP5 1117 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 MKL2Q9ULH7 1088 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 HS3ST3B1Q9Y662 390 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 KCNE2Q9Y6J6 123 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 IGLV3-12A0A075B6K2 115 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 SOCS6O14544 535 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 EIF3HO15372 352 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 OR1F1O43749 312 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 NRP2O60462 931 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 WFS1O76024 890 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 HPP00738 406 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 SERPIND1P05546 499 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 NPPBP16860 134 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 RPL21P46778 160 aaKnown RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 GLRBP48167 497 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 FOXL2P58012 376 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 ETF1P62495 437 aaKnown RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 RGS1Q08116 209 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 HERC3Q15034 1050 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 MINDY4Q4G0A6 757 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 FHL5Q5TD97 284 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 ATG9BQ674R7 924 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 STEAP4Q687X5 459 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 TRMT10BQ6PF06 316 aaKnown RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 LCTLQ6UWM7 567 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 ISLR2Q6UXK2 745 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 C3orf62Q6ZUJ4 267 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 COX15Q7KZN9 410 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 REC114Q7Z4M0 266 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 ASPGQ86U10 573 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 LRRC56Q8IYG6 542 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 RBMXL3Q8N7X1 1067 aaKnown RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 THAP3Q8WTV1 239 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 C10orf90Q96M02 699 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 PWWP2AQ96N64 755 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 SGPP1Q9BX95 441 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF160Q9HCG1 818 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 RIC8BQ9NVN3 520 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 MOCS1Q9NZB8 636 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 WHRNQ9P202 907 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 PYCARDQ9ULZ3 195 aa6.95□□□□□ -1.3
SCFD1-222ENST00000556768 COPG1Q9Y678 874 aaKnown RBP6.95□□□□□ -1.3
SCFD1-222ENST00000556768 FAM95CA0A1B0GW59 222 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 NDUFS4O43181 175 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 H2AFYO75367 372 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SORBS2O94875 1100 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 AGFG2O95081 481 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 NSA2O95478 260 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CYC1P08574 325 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 C8orf89P0DMQ9 161 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 IMPDH2P12268 514 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CDH1P12830 882 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 IL10P22301 178 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 HPDP32754 393 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CSNK1G2P78368 415 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 POU4F1Q01851 419 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PLAURQ03405 335 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CLCQ05315 142 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PHKG1Q16816 387 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PLEKHN1Q494U1 663 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 RIPOR1Q6ZS17 1223 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 ABHD13Q7L211 337 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 ADAMTSL2Q86TH1 951 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 ZC3HC1Q86WB0 502 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 OR51Q1Q8NH59 317 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SUN3Q8TAQ9 357 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PYCR2Q96C36 320 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 FBXL8Q96CD0 374 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CNDP1Q96KN2 507 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 LMF1Q96S06 567 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 AIF1LQ9BQI0 150 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CAPS2Q9BXY5 557 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 DPH5Q9H2P9 285 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 RHOJQ9H4E5 214 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CNOT10Q9H9A5 744 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SAYSD1Q9NPB0 183 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 LUZP4Q9P127 313 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CTNNAL1Q9UBT7 734 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SLC22A7Q9Y694 548 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SPTBP11277 2137 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 FEZF1A0PJY2 475 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 E7ESA3 106 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 FOXS1O43638 330 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 BMP10O95393 424 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 TSPAN12O95859 305 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 S100BP04271 92 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SERPINA7P05543 415 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 GSTA2P09210 222 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 STMN1P16949 149 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF37AP17032 561 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 GNAZP19086 355 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 BCL6P41182 706 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms