RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF740Q8NDX6 193 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 CREB3L4Q8TEY5 395 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 KLHL6Q8WZ60 621 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 STARD8Q92502 1023 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 C3orf30Q96M34 536 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 KCNC2Q96PR1 638 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 OR2A5Q96R48 311 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 OR52B2Q96RD2 323 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 ZBTB18Q99592 522 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 TBCDQ9BTW9 1192 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 STRADBQ9C0K7 418 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 KLHL25Q9H0H3 589 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 SPNS1Q9H2V7 528 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 ZNF768Q9H5H4 540 aaKnown RBP8.81□□□□□ -1
ACTN1-218ENST00000556343 COPS7BQ9H9Q2 264 aaPredicted RBP8.81□□□□□ -1
ACTN1-218ENST00000556343 PARD6AQ9NPB6 346 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 FARSBQ9NSD9 589 aaKnown RBP8.81□□□□□ -1
ACTN1-218ENST00000556343 TMEM45AQ9NWC5 275 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 SIRT5Q9NXA8 310 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 SEMA5BQ9P283 1151 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 PDP2Q9P2J9 529 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 PILRAQ9UKJ1 303 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 GOLGA4Q13439 2230 aaKnown RBP8.81□□□□□ -1
ACTN1-218ENST00000556343 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
ACTN1-218ENST00000556343 IGHV5-51A0A0C4DH38 117 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 GNG14A0A1W2PPG7 69 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 LRIT2A6NDA9 550 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 H0YGG7 62 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 NTN3O00634 580 aaPredicted RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 RFPL3O75679 317 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 EIF2S1P05198 315 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 JUNP05412 331 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 PRR35P0CG20 571 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 PVRP15151 417 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 NELFEP18615 380 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 CSTF2P33240 577 aaKnown RBP eCLIP8.8□□□□□ -1
ACTN1-218ENST00000556343 RPL3P39023 403 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 ASMTP46597 345 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 LSSP48449 732 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 SEPHS1P49903 392 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 VSX2P58304 361 aaPredicted RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 ARF3P61204 181 aaPredicted RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 PPP1CAP62136 330 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 RPL38P63173 70 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 YBX1P67809 324 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 GRM7Q14831 915 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 HERC3Q15034 1050 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 TRIP6Q15654 476 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 ZIC1Q15915 447 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 TOR1AIP1Q5JTV8 583 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 PHF19Q5T6S3 580 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 YOD1Q5VVQ6 348 aaPredicted RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 GARNL3Q5VVW2 1013 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 IL23RQ5VWK5 629 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 TLDC1Q6P9B6 456 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 CYP20A1Q6UW02 462 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 RBM44Q6ZP01 1051 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 TRPM8Q7Z2W7 1104 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 NUDT13Q86X67 352 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 MIER2Q8N344 545 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 METTL4Q8N3J2 472 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 D2HGDHQ8N465 521 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 CPSF7Q8N684 471 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 CSNK1A1LQ8N752 337 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 ANKRD53Q8N9V6 530 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 OR2L5Q8NG80 312 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 OR8K5Q8NH50 307 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 CHTF18Q8WVB6 975 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 GAL3ST3Q96A11 431 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 TM4SF19Q96DZ7 209 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 CMTM5Q96DZ9 223 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 SLC41A2Q96JW4 573 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 F2RL3Q96RI0 385 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 HBEGFQ99075 208 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 PRPF18Q99633 342 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 NUDT22Q9BRQ3 303 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 MS4A8Q9BY19 250 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 OR51B5Q9H339 312 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 ASIC5Q9NY37 505 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 MCM8Q9UJA3 840 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 ADAM29Q9UKF5 820 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 ATXN7L1Q9ULK2 861 aaPredicted RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 G3BP2Q9UN86 482 aaKnown RBP8.8□□□□□ -1
ACTN1-218ENST00000556343 SPACA6W5XKT8 324 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 PCM1Q15154 2024 aa8.8□□□□□ -1
ACTN1-218ENST00000556343 IGHV5-10-1A0A0J9YXX1 117 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.79□□□□□ -1
ACTN1-218ENST00000556343 A0A1W2PQM1 296 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 CCT8L1PA6NM43 557 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 FCHO1O14526 889 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 ERI3O43414 337 aaKnown RBP8.79□□□□□ -1
ACTN1-218ENST00000556343 KIF1CO43896 1103 aaKnown RBP8.79□□□□□ -1
ACTN1-218ENST00000556343 PCDH7O60245 1069 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 CTSVO60911 334 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 CBFA2T3O75081 653 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 MSL3P1P0C860 447 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 THRAP10827 490 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 HOXB3P14651 431 aaPredicted RBP8.79□□□□□ -1
ACTN1-218ENST00000556343 SDHBP21912 280 aa8.79□□□□□ -1
ACTN1-218ENST00000556343 TGM1P22735 817 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms