RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 RAD51CO43502 376 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 SEC24DO94855 1032 aaPredicted RBP13.04□□□□□ -0.32
PCNX4-209ENST00000555569 SERPIND1P05546 499 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 SCTRP47872 440 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 CDKL1Q00532 357 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 RGS1Q08116 209 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 ILF2Q12905 390 aaKnown RBP13.04□□□□□ -0.32
PCNX4-209ENST00000555569 ELOAQ14241 798 aaKnown RBP13.04□□□□□ -0.32
PCNX4-209ENST00000555569 CPEB2Q7Z5Q1 589 aaKnown RBP13.04□□□□□ -0.32
PCNX4-209ENST00000555569 THOC6Q86W42 341 aaKnown RBP13.04□□□□□ -0.32
PCNX4-209ENST00000555569 AFAP1L2Q8N4X5 818 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 ZNF740Q8NDX6 193 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 SPATA4Q8NEY3 305 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 OR1N1Q8NGS0 311 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 GRHL3Q8TE85 626 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 MOCOSQ96EN8 888 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 MCMBPQ9BTE3 642 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 SPNS1Q9H2V7 528 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 PELI2Q9HAT8 420 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 POPDC3Q9HBV1 291 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 SAYSD1Q9NPB0 183 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 PLA2G3Q9NZ20 509 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 CTNNAL1Q9UBT7 734 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 OARD1Q9Y530 152 aa13.04□□□□□ -0.32
PCNX4-209ENST00000555569 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
PCNX4-209ENST00000555569 DOPEY1Q5JWR5 2465 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 IGHV3-20A0A0C4DH32 117 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ZNF860A6NHJ4 632 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 DDAH2O95865 285 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ALOX12P18054 663 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 IL10P22301 178 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 SSTR1P30872 391 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 AHRP35869 848 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 AGTR2P50052 363 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 SLC12A2P55011 1212 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 SKP1P63208 163 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 REEP5Q00765 189 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 POU4F1Q01851 419 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 C2orf54Q08AI8 447 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 TSNQ15631 228 aaKnown RBP13.03□□□□□ -0.32
PCNX4-209ENST00000555569 RPUSD3Q6P087 351 aaKnown RBP13.03□□□□□ -0.32
PCNX4-209ENST00000555569 NXPE4Q6UWF7 544 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ANKRD37Q7Z713 158 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 TMPRSS11BQ86T26 416 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ADAMTSL2Q86TH1 951 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 CEP97Q8IW35 865 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ST6GALNAC3Q8NDV1 305 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 NT5CQ8TCD5 201 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ANKRD49Q8WVL7 239 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 CDKL2Q92772 493 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 HAS2Q92819 552 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 PEX11GQ96HA9 241 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 OR1F2PQ96R84 312 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 EGFL8Q99944 293 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 AIF1LQ9BQI0 150 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 GPAMQ9HCL2 828 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 SLC22A14Q9Y267 594 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 KCNE2Q9Y6J6 123 aa13.03□□□□□ -0.32
PCNX4-209ENST00000555569 TRAV17A0A0B4J275 112 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 OR2W5A6NFC9 320 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 CXorf49A8MYA2 514 aaPredicted RBP13.02□□□□□ -0.33
PCNX4-209ENST00000555569 E2F3O00716 465 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 GALR3O60755 368 aaPredicted RBP13.02□□□□□ -0.33
PCNX4-209ENST00000555569 PIAS1O75925 651 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 ZNF888P0CJ79 500 aaPredicted RBP13.02□□□□□ -0.33
PCNX4-209ENST00000555569 RNF224P0DH78 156 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 CASQ1P31415 396 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 HNMTP50135 292 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 TNFSF10P50591 281 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 RHAGQ02094 409 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 BTBD16Q32M84 506 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 ABHD17BQ5VST6 288 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 NIPAL1Q6NVV3 410 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 FAM180AQ6UWF9 173 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 FRA10AC1Q70Z53 315 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 ABHD13Q7L211 337 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 AMER2Q8N7J2 671 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 PLPP5Q8NEB5 264 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 OR5T3Q8NGG3 340 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 FAR1Q8WVX9 515 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 RBCK1Q9BYM8 510 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 RNF32Q9H0A6 362 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 LANCL2Q9NS86 450 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 GRHL1Q9NZI5 618 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 TXNDC16Q9P2K2 825 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 ERRFI1Q9UJM3 462 aaPredicted RBP13.02□□□□□ -0.33
PCNX4-209ENST00000555569 SLC5A6Q9Y289 635 aa13.02□□□□□ -0.33
PCNX4-209ENST00000555569 MTO1Q9Y2Z2 717 aaKnown RBP13.02□□□□□ -0.33
PCNX4-209ENST00000555569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCNX4-209ENST00000555569 URADA6NGE7 173 aa13.01□□□□□ -0.33
PCNX4-209ENST00000555569 CHST10O43529 356 aa13.01□□□□□ -0.33
PCNX4-209ENST00000555569 CDC123O75794 336 aaPredicted RBP13.01□□□□□ -0.33
PCNX4-209ENST00000555569 WDR47O94967 919 aa13.01□□□□□ -0.33
PCNX4-209ENST00000555569 WISP3O95389 354 aaPredicted RBP13.01□□□□□ -0.33
PCNX4-209ENST00000555569 WDPCPO95876 746 aa13.01□□□□□ -0.33
PCNX4-209ENST00000555569 B3GALT4O96024 378 aa13.01□□□□□ -0.33
PCNX4-209ENST00000555569 F10P00742 488 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms