RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 NUDT22Q9BRQ3 303 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 SARGQ9BW04 601 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 MS4A8Q9BY19 250 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 ADGRE2Q9UHX3 823 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 EIF3LQ9Y262 564 aaKnown RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 AP1M2Q9Y6Q5 423 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 A0A1W2PQM1 296 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 LRIT2A6NDA9 550 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 A8MU76 341 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 ANKRD65E5RJM6 399 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 NPIPB8E9PQR5 432 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 AGRPO00253 132 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PLPP1O14494 284 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 DUX1O43812 170 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 CLEC3AO75596 197 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 B3GALT4O96024 378 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 EIF2S1P05198 315 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 AHRP35869 848 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SEPHS1P49903 392 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PLA2G16P53816 162 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 RPS15AP62244 130 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 CCL7P80098 99 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 GPLD1P80108 840 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 NAA25Q14CX7 972 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SUZ12Q15022 739 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 GSTA3Q16772 222 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 C10orf62Q5T681 223 aaPredicted RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 GK5Q6ZS86 529 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 COMMD6Q7Z4G1 85 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 MIER2Q8N344 545 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 TBC1D19Q8N5T2 526 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 KCT2Q8NC54 265 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 TTLQ8NG68 377 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 IFI44Q8TCB0 444 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 RHBDD1Q8TEB9 315 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 C11orf24Q96F05 449 aaPredicted RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 TSSK3Q96PN8 268 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SERPINI1Q99574 410 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 ZFYVE21Q9BQ24 234 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 REXO4Q9GZR2 422 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 ACTL8Q9H568 366 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SYNDIG1Q9H7V2 258 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SDR39U1Q9NRG7 319 aaPredicted RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 C1GALT1Q9NS00 363 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 STARD5Q9NSY2 213 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SEMA4GQ9NTN9 838 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 DNAAF2Q9NVR5 837 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 EPHA6Q9UF33 1036 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 KLK4Q9Y5K2 254 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 C4orf51C9J302 202 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 H0YGG7 62 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 P2RX6O15547 441 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 C9P02748 559 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 RPLP0P05388 317 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 KLK1P06870 262 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 CKMT1AP12532 417 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PNLIPP16233 465 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SDC1P18827 310 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 IL12AP29459 219 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 ARF3P61204 181 aaPredicted RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 MAD2L1Q13257 205 aaPredicted RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 CUL3Q13618 768 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 KRT72Q14CN4 511 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 HKDC1Q2TB90 917 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 CACHD1Q5VU97 1274 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 FAM91A1Q658Y4 838 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 DBX2Q6ZNG2 339 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 UBE3DQ7Z6J8 389 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 ASPGQ86U10 573 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 SNX32Q86XE0 403 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PLXDC1Q8IUK5 500 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 KRTCAP2Q8N6L1 136 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 AMER3Q8N944 861 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 TRPV3Q8NET8 790 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 OR6C4Q8NGE1 309 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 CDC26Q8NHZ8 85 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PROKR1Q8TCW9 393 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 GFM2Q969S9 779 aaKnown RBP9.74□□□□□ -0.85
SRP54-208ENST00000555557 NSL1Q96IY1 281 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 BRINP2Q9C0B6 783 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 RAB33BQ9H082 229 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PARD6AQ9NPB6 346 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 NMRK1Q9NWW6 199 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 ANKMY1Q9P2S6 941 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 PIEZO1Q92508 2521 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 UNC13CQ8NB66 2214 aa9.74□□□□□ -0.85
SRP54-208ENST00000555557 TLCD2A6NGC4 264 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 ANKRD28O15084 1053 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 PCDH7O60245 1069 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 EEDO75530 441 aaKnown RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 SLC22A3O75751 556 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 KLHL18O94889 574 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 LRATO95237 230 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 FKBP9O95302 570 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 ANXA4P09525 319 aaPredicted RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms