RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 KLHL17Q6TDP4 642 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 GALNT10Q86SR1 603 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 DUSP18Q8NEJ0 188 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OR4L1Q8NH43 312 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FANK1Q8TC84 345 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 SERPINB11Q96P15 392 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 SEMA3CQ99985 751 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ZYG11BQ9C0D3 744 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OR51B5Q9H339 312 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 AMBNQ9NP70 447 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FAM8A1Q9UBU6 413 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OGDHLQ9ULD0 1010 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FAM50BQ9Y247 325 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 MED16Q9Y2X0 877 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 PCDHGA6Q9Y5G7 932 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 DOCK4Q8N1I0 1966 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FABP12A6NFH5 140 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 MYO1GB0I1T2 1018 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 E9PQ18 207 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FABP7O15540 132 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 GPX5O75715 221 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 RPP40O75818 363 aaKnown RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 HOXB8P17481 243 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 AGTR2P50052 363 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 TSNQ15631 228 aaKnown RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 TAF12Q16514 161 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 TSTQ16762 297 aaKnown RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 MS4A13Q5J8X5 152 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 LRRC66Q68CR7 880 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ATG16L2Q8NAA4 619 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 LPCAT1Q8NF37 534 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OR2T11Q8NH01 316 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 HRASLS5Q96KN8 279 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 TTPALQ9BTX7 342 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 CNPPD1Q9BV87 410 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 CATSPERZQ9NTU4 200 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 RBFOX1Q9NWB1 397 aaKnown RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 TMEM248Q9NWD8 314 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 CCL15-CCL14A0A0B4J2E2 113 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 IQCMA0A1B0GVH7 501 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 NCF1BA6NI72 391 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 NCF1CA8MVU1 366 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 CDC7O00311 574 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 KHNYNO15037 678 aaKnown RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 NCF1P14598 390 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ARSBP15848 533 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 RAB3AP20336 220 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ITGALP20701 1170 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 DGKQP52824 942 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 CLDN20P56880 219 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 MRPS6P82932 125 aaKnown RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 EIF4HQ15056 248 aaKnown RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 CCL15Q16663 113 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 C6orf136Q5SQH8 315 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SDHAF4Q5VUM1 108 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 MZT2BQ6NZ67 158 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SPATA2LQ8IUW3 424 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 GHDCQ8N2G8 530 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 CLHC1Q8NHS4 586 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ST8SIA2Q92186 375 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 RPRD1AQ96P16 312 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SORCS2Q96PQ0 1159 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF416Q9BWM5 594 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SHARPINQ9H0F6 387 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ELOVL6Q9H5J4 265 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 CUEDC1Q9NWM3 386 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 FLRT1Q9NZU1 646 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 GLS2Q9UI32 602 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 DOCK3Q8IZD9 2030 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 F8W810 466 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 AGRPO00253 132 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ORC5O43913 435 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SLC43A1O75387 559 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 RHOBTB1O94844 696 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 RPS17P08708 135 aaKnown RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 CNPP09543 421 aaKnown RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 OR4Q2P0C623 313 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF865P0CJ78 1059 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-203ENST00000554873 STC1P52823 247 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 RAB14P61106 215 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 WSCD2Q2TBF2 565 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 TFAP2EQ6VUC0 442 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF600Q6ZNG1 722 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ZSWIM9Q86XI8 627 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SCN4BQ8IWT1 228 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 BBS7Q8IWZ6 715 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 TIGD4Q8IY51 512 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 GPR152Q8TDT2 470 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 BRI3BPQ8WY22 251 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 IGSF8Q969P0 613 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SGIP1Q9BQI5 828 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SLC35C2Q9NQQ7 365 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 SLC39A1Q9NY26 324 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 GPR83Q9NYM4 423 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 GALPQ9UBC7 116 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 UBQLN2Q9UHD9 624 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ACSL5Q9ULC5 683 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF490Q9ULM2 529 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms