RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MYH1P12882 1939 aa1.4□□□□□ -2.18
PRPF39-208ENST00000554785 AKAP13Q12802 2813 aa1.4□□□□□ -2.18
PRPF39-208ENST00000554785 OTOGLQ3ZCN5 2332 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 BOD1L1Q8NFC6 3051 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SPENQ96T58 3664 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 TEP1Q99973 2627 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 NBPF19A0A087WUL8 3843 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 A0A1W2PRQ8 180 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PRR23AA6NEV1 266 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CLDN4O14493 209 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 FGF17O60258 216 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 RNASEH1O60930 286 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CAVIN2O95810 425 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 NR3C1P04150 777 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 INHBAP08476 426 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SMIM18P0DKX4 95 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CYBAP13498 195 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 IFNAR1P17181 557 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 GNAZP19086 355 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CYP11B2P19099 503 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 TCEA1P23193 301 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 AZGP1P25311 298 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PTPN3P26045 913 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 MARK3P27448 753 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PDX1P52945 283 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 POLR2LP62875 67 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PPARDQ03181 441 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 DMPKQ09013 629 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF273Q14593 569 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ZRSR1Q15695 479 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SYT14P1Q58G82 188 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ELFN2Q5R3F8 820 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 C11orf63Q6NUN7 778 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SUSD1Q6UWL2 747 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CXCL17Q6UXB2 119 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PPP1R21Q6ZMI0 780 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 G2E3Q7L622 706 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 NUP54Q7Z3B4 507 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 GALNTL5Q7Z4T8 443 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF554Q86TJ5 538 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 NUDT13Q86X67 352 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 DZIP1Q86YF9 867 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CCAR2Q8N163 923 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 CIARTQ8N365 385 aaPredicted RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 DNAJC22Q8N4W6 341 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF611Q8N823 705 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 NKAIN3Q8N8D7 197 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 IQUBQ8NA54 791 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 NPEPL1Q8NDH3 523 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 GPRC5AQ8NFJ5 357 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 OR2T12Q8NG77 320 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 OR1J1Q8NGS3 322 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SETD6Q8TBK2 473 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 IRGQQ8WZA9 623 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 EXT2Q93063 718 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SPSB1Q96BD6 273 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 MOB3AQ96BX8 217 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 DHX58Q96C10 678 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ALG14Q96F25 216 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 OTUB1Q96FW1 271 aaPredicted RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 HES6Q96HZ4 224 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 RPGRIP1Q96KN7 1286 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 GLT1D1Q96MS3 346 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 MUS81Q96NY9 551 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SPAG5Q96R06 1193 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 EPYCQ99645 322 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PSD2Q9BQI7 771 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 Q9N2K0 584 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SH3GLB2Q9NR46 395 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ECHDC1Q9NTX5 307 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ZFP57Q9NU63 452 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF701Q9NV72 531 aaPredicted RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 TBC1D7Q9P0N9 293 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ISY1Q9ULR0 285 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 LIPGQ9Y5X9 500 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 R4GN57 208 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 DOCK8Q8NF50 2099 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 KIF16BQ96L93 1317 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 SYNRGQ9UMZ2 1314 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 RPAP1Q9BWH6 1393 aaPredicted RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 ASH1LQ9NR48 2969 aaKnown RBP1.4□□□□□ -2.19
PRPF39-208ENST00000554785 HECTD1Q9ULT8 2610 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 PARP14Q460N5 1801 aa1.4□□□□□ -2.19
PRPF39-208ENST00000554785 TICRRQ7Z2Z1 1910 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 BAZ2AQ9UIF9 1905 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MICAL3Q7RTP6 2002 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ASXL3Q9C0F0 2248 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 FAM172BPA6NC97 362 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 DUXAA6NLW8 204 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ANXA2P2A6NMY6 339 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CCDC188H7C350 402 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 BMPR1BO00238 502 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 P2RY10O00398 339 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 TIMP1P01033 207 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ASGR1P07306 291 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SAGP10523 405 aaPredicted RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 HAPLN1P10915 354 aaPredicted RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 GLULP15104 373 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PAX1P15863 534 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CD22P20273 847 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms