RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FLNBO75369 2602 aaKnown RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 GYG2O15488 501 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 GSC2O15499 205 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 ZSCAN9O15535 394 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 DIAPH2O60879 1101 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 SMIM24O75264 130 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 VPS26AO75436 327 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 ENO1P06733 434 aaKnown RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 RAB40ALP0C0E4 278 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 IMPDH1P20839 514 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 GRB7Q14451 532 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TTLL9Q3SXZ7 439 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 WASHC2DQ5SRD0 308 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 LCN10Q6JVE6 187 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 RINLQ6ZS11 566 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 ARHGAP24Q8N264 748 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 NKAPQ8N5F7 415 aaKnown RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TEX9Q8N6V9 391 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 PTERQ96BW5 349 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 MIPEPQ99797 713 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 C17orf62Q9BQA9 187 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 NDC1Q9BTX1 674 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 SPRTNQ9H040 489 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.56e-6■■□□□ 12.1
SHMT2-214ENST00000554604 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 GPN3Q9UHW5 284 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-214ENST00000554604 ZDHHC2Q9UIJ5 367 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TCFL5Q9UL49 500 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TMCO1Q9UM00 188 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 SRPK3Q9UPE1 567 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 PADI2Q9Y2J8 665 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 MED16Q9Y2X0 877 aa11.9□□□□□ -0.5
SHMT2-214ENST00000554604 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 SLC22A2O15244 555 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 HCRTR1O43613 425 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ZBTB14O43829 449 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 KERAO60938 352 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 FKBP9O95302 570 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 MATN4O95460 622 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 CATP04040 527 aaKnown RBP11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-214ENST00000554604 MNAT1P51948 309 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 NAA20P61599 178 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 IL10RAQ13651 578 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
SHMT2-214ENST00000554604 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 SLC9B1Q4ZJI4 515 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ZC3H12BQ5HYM0 836 aaKnown RBP11.89□□□□□ -0.51
SHMT2-214ENST00000554604 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 C1orf189Q5VU69 101 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 FIGLAQ6QHK4 219 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 FAM198BQ6UWH4 519 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 FRMD7Q6ZUT3 714 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ACAD11Q709F0 780 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 DNAJC22Q8N4W6 341 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ZNF655Q8N720 491 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-214ENST00000554604 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 KIAA1191Q96A73 305 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 ATOH8Q96SQ7 321 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
SHMT2-214ENST00000554604 CNTRLQ7Z7A1 2325 aa11.89□□□□□ -0.51
SHMT2-214ENST00000554604 KRT87PA6NCN2 255 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 B2RBV5 119 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 SUV39H1O43463 412 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 ALAS2P22557 587 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 GRIA3P42263 894 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 GABRA4P48169 554 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 HERVK_113P63132 956 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 DCDP81605 110 aaKnown RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 TSTA3Q13630 321 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 GBX1Q14549 363 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 NCF4Q15080 339 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 CCSMST1Q4G0I0 132 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 ZNF678Q5SXM1 525 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 MLIPQ5VWP3 458 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 RHBDD2Q6NTF9 364 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 PAQR3Q6TCH7 311 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 APLFQ8IW19 511 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 CPSF7Q8N684 471 aaKnown RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 OR9A1PQ8NGU1 263 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 STAG3L4Q8TBR4 150 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 PROKR1Q8TCW9 393 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 DLG3Q92796 817 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 KCNJ9Q92806 393 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 ZUFSPQ96AP4 578 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 MAELQ96JY0 434 aaKnown RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 GPR21Q99679 349 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms