RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TMPRSS11BQ86T26 416 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 TMEM151BQ8IW70 566 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 FDCSPQ8NFU4 85 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 SLC13A3Q8WWT9 602 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 RHBDF1Q96CC6 855 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 TM4SF19Q96DZ7 209 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 UBXN10Q96LJ8 280 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 CYTH2Q99418 400 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 NUDT9Q9BW91 350 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 TGIF2Q9GZN2 237 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 ACSS3Q9H6R3 686 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 C3orf18Q9UK00 162 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 MRPS2Q9Y399 296 aaKnown RBP12.4□□□□□ -0.42
SHMT2-211ENST00000554310 NDUFS4O43181 175 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 OR1F1O43749 312 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 CDH16O75309 829 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 FAM155BO75949 473 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 STATHP02808 62 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 CYC1P08574 325 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 SLC35E2BP0CK96 405 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 ACPPP15309 386 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 AHRP35869 848 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 GUCY1A3Q02108 690 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 TLE1Q04724 770 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 AIMP2Q13155 320 aaKnown RBP12.39□□□□□ -0.43
SHMT2-211ENST00000554310 PWP1Q13610 501 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 MYBPC3Q14896 1274 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 RASA2Q15283 850 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 VWA2Q5GFL6 755 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 CATSPEREQ5SY80 951 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 NIPAL1Q6NVV3 410 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 KIRREL2Q6UWL6 708 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 RAPH1Q70E73 1250 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 CMC1Q7Z7K0 106 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 TBC1D1Q86TI0 1168 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-211ENST00000554310 TDRPQ86YL5 185 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 GPSM1Q86YR5 675 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 ZC3H7AQ8IWR0 971 aaKnown RBP12.39□□□□□ -0.43
SHMT2-211ENST00000554310 GALNT16Q8N428 558 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 SPATA6LQ8N4H0 392 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 TEX19Q8NA77 164 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 ZCCHC10Q8TBK6 192 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 KIAA1191Q96A73 305 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 TSNARE1Q96NA8 513 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 SMAD5Q99717 465 aaKnown RBP12.39□□□□□ -0.43
SHMT2-211ENST00000554310 AIF1LQ9BQI0 150 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 UNKQ9C0B0 810 aaKnown RBP12.39□□□□□ -0.43
SHMT2-211ENST00000554310 EPN3Q9H201 632 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 ANKHQ9HCJ1 492 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 WWOXQ9NZC7 414 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 FETUBQ9UGM5 382 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 ZFP69BQ9UJL9 534 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 SLC22A14Q9Y267 594 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 SLC22A7Q9Y694 548 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 FLNCQ14315 2725 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 LRRK2Q5S007 2527 aa12.39□□□□□ -0.43
SHMT2-211ENST00000554310 A0A1W2PQ72 361 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-211ENST00000554310 A6NL46 340 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-211ENST00000554310 IDSB3KWA1 339 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 FFAR3O14843 346 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 GPR42O15529 346 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 LCMT2O60294 686 aaKnown RBP12.38□□□□□ -0.43
SHMT2-211ENST00000554310 DPM1O60762 260 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 WDR47O94967 919 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 S100BP04271 92 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-211ENST00000554310 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-211ENST00000554310 IL1RNP18510 177 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 GNAZP19086 355 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 GGT5P36269 586 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 SCTRP47872 440 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 SKP1P63208 163 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 MEF2AQ02078 507 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-211ENST00000554310 HERC3Q15034 1050 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 SULT1C3Q6IMI6 304 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 NXPE4Q6UWF7 544 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 PRSS58Q8IYP2 241 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 OR11G2Q8NGC1 345 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 OR9A4Q8NGU2 314 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 NT5CQ8TCD5 201 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 TMEM79Q9BSE2 394 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 YIPF2Q9BWQ6 316 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 TRIM4Q9C037 500 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 SPNS1Q9H2V7 528 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 NMRAL1Q9HBL8 299 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 GPRC5BQ9NZH0 403 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 RNF112Q9ULX5 631 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 ACTL7BQ9Y614 415 aa12.38□□□□□ -0.43
SHMT2-211ENST00000554310 A0A087X1B8 175 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 CCDC189A1A4V9 331 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 HPP00738 406 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
SHMT2-211ENST00000554310 CXCR2P25025 360 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms