RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 RGS14O43566 566 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 PRAMEF10O60809 474 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 SEMA7AO75326 666 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 WFS1O76024 890 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 ITIH1P19827 911 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 HRH2P25021 359 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 EPHA3P29320 983 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 CD97P48960 835 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 PHEXP78562 749 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 DOC2AQ14183 400 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 E2F2Q14209 437 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 KIR2DS3Q14952 304 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 NAA25Q14CX7 972 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 CPSF6Q16630 551 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 IMPG1Q17R60 797 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 SPDYAQ5MJ70 313 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 ZCCHC8Q6NZY4 707 aaKnown RBP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 MED27Q6P2C8 311 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 NXPE4Q6UWF7 544 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 C6orf89Q6UWU4 347 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 SLCO4C1Q6ZQN7 724 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 MTDHQ86UE4 582 aaKnown RBP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 ATCAYQ86WG3 371 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 TICAM1Q8IUC6 712 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 NAGSQ8N159 534 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 KRT78Q8N1N4 520 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 SLC37A2Q8TED4 501 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 SSC4DQ8WTU2 575 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 NEIL2Q969S2 332 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 TUBGCP3Q96CW5 907 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 PPP1R36Q96LQ0 422 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 PITHD1Q9GZP4 211 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 XKR8Q9H6D3 395 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 WDR55Q9H6Y2 383 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-208ENST00000553868 FOXJ2Q9P0K8 574 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 TAC3Q9UHF0 121 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 BTRCQ9Y297 605 aa13.87□□□□□ -0.19
SHMT2-208ENST00000553868 KCNE1BA0A087WTH5 132 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 H0YIV9 168 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 FCHO1O14526 889 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 FFAR3O14843 346 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 YY2O15391 372 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 GPR42O15529 346 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 FKBP9O95302 570 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 JUNP05412 331 aaKnown RBP13.86□□□□□ -0.19
SHMT2-208ENST00000553868 LINC00032P0C843 101 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 LBPP18428 481 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 NCF2P19878 526 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-208ENST00000553868 CMPK1P30085 196 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 CCR8P51685 355 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 HHEXQ03014 270 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 TUBB3Q13509 450 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 SPIDRQ14159 915 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 GPR18Q14330 331 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
SHMT2-208ENST00000553868 LSM12Q3MHD2 195 aaKnown RBP13.86□□□□□ -0.19
SHMT2-208ENST00000553868 FRG2Q64ET8 278 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 KLHL35Q6PF15 583 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 CCDC121Q6ZUS5 278 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 C2orf73Q8N5S3 287 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-208ENST00000553868 TBC1D19Q8N5T2 526 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 LINC01555Q8NAE3 123 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 OR4E2Q8NGC2 313 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 SELENOMQ8WWX9 145 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 USP7Q93009 1102 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 ERP27Q96DN0 273 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 PPP3R2Q96LZ3 170 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 FRG2BQ96QU4 278 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 OR52B2Q96RD2 323 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 AIF1LQ9BQI0 150 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 TUBB6Q9BUF5 446 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 UCK1Q9HA47 277 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 ADGRE2Q9UHX3 823 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 ZNF490Q9ULM2 529 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-208ENST00000553868 ADGRG4Q8IZF6 3080 aa13.86□□□□□ -0.19
SHMT2-208ENST00000553868 A0A1W2PPV9 198 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 SERTM1A2A2V5 107 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 PIPSLA2A3N6 862 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ISM1B1AKI9 464 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 E9PBE3 544 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 SLC22A2O15244 555 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 KLHL41O60662 606 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 CHRM5P08912 532 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-208ENST00000553868 CDH1P12830 882 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 HSD3B1P14060 373 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 PCSK2P16519 638 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 GNLYP22749 145 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 HSD3B2P26439 372 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ADSLP30566 484 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-208ENST00000553868 SERPINB1P30740 379 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 FASLGP48023 281 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 PRDX1Q06830 199 aaKnown RBP13.85□□□□□ -0.19
SHMT2-208ENST00000553868 CSTF3Q12996 717 aaKnown RBP13.85□□□□□ -0.19
SHMT2-208ENST00000553868 SLBPQ14493 270 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHMT2-208ENST00000553868 NR0B2Q15466 257 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 SMU1Q2TAY7 513 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ATP6AP1LQ52LC2 224 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms