RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CACNA1IQ9P0X4 2223 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 EML5Q05BV3 1969 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 TRBV5-3A0A0A0MS03 114 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 CCDC163A0A0D9SF12 145 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 OR6C74A6NCV1 312 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 VGLL3A8MV65 326 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 FKBP6O75344 327 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 PIM1P11309 404 aaPredicted RBP18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 COX7A2P14406 83 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 TPP2P29144 1249 aaPredicted RBP18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 PTPN6P29350 595 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 GRK3P35626 688 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 GRIA3P42263 894 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 ATXN3P54252 364 aaPredicted RBP18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 SIGLEC14Q08ET2 396 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 TRAP1Q12931 704 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 ELOCQ15369 112 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 LRIF1Q5T3J3 769 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 CAMKMTQ7Z624 323 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 BHLHE22Q8NFJ8 381 aaPredicted RBP18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 PYDC1Q8WXC3 89 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 STARD8Q92502 1023 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 ANKRD27Q96NW4 1050 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 AICDAQ9GZX7 198 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 PAIP1Q9H074 479 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 KCNH6Q9H252 994 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 LHX9Q9NQ69 397 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 AHSPQ9NZD4 102 aa18.7■□□□□ 0.58
RBFOX1-215ENST00000553186 YY2O15391 372 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 LAMP1P11279 417 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 HOXB9P17482 250 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 POLR2CP19387 275 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 BSGP35613 385 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 CSNK1EP49674 416 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 SELPLGQ14242 412 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ZIC1Q15915 447 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ANKRD26P1Q6NSI1 321 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 UBE3DQ7Z6J8 389 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ANKRD46Q86W74 232 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 PAQR7Q86WK9 346 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 OR8J3Q8NGG0 315 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 C16orf78Q8WTQ4 265 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 INPP5KQ9BT40 448 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 RMND5AQ9H871 391 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 MAPRE3Q9UPY8 281 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 FAM221BA6H8Z2 402 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 LRIT2A6NDA9 550 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 RTCAO00442 366 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 VILLO15195 856 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ERN1O75460 977 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 UGT2B7P16662 529 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 GSTM2P28161 218 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 AHRP35869 848 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 GSK3BP49841 420 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 EEFSECP57772 596 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 HHEXQ03014 270 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 TMEM26Q6ZUK4 368 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 DNAJB8Q8NHS0 232 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 COQ8BQ96D53 544 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ITCHQ96J02 903 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 NECAB3Q96P71 396 aaPredicted RBP18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ALG2Q9H553 416 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 MYNNQ9NPC7 610 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ACTR10Q9NZ32 417 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 ERVK-11Q9UQG0 969 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 PCDHB14Q9Y5E9 798 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 PCDHGA4Q9Y5G9 962 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 AP1M2Q9Y6Q5 423 aa18.69■□□□□ 0.58
RBFOX1-215ENST00000553186 B4DGG1 531 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 DNAJA2O60884 412 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 TDGF1P13385 188 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 MTPNP58546 118 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 LIPEQ05469 1076 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 HYAL2Q12891 473 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 GTDC1Q4AE62 458 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 FAM71E1Q6IPT2 247 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 DNAJC14Q6Y2X3 702 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 OR10G6Q8NH81 332 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 ATP6V1HQ9UI12 483 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 A0A096LPI6 279 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 BCAT2O15382 392 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 NDUFS4O43181 175 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 TNFSF14O43557 240 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 SNRNP200O75643 2136 aaKnown RBP18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 CDKN2CP42773 168 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 FNTBP49356 437 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 TAS2R50P59544 299 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 AP2B1P63010 937 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 ADPRMQ3LIE5 342 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 CPTPQ5TA50 214 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 TRIM73Q86UV7 250 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 RBM12BQ8IXT5 1001 aaKnown RBP18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 MFSD9Q8NBP5 474 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 LMX1AQ8TE12 382 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 MIEF2Q96C03 454 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 IKZF5Q9H5V7 419 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 REEP4Q9H6H4 257 aa18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 PRMT8Q9NR22 394 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 FAM120CQ9NX05 1096 aaKnown RBP18.68■□□□□ 0.58
RBFOX1-215ENST00000553186 BCAP29Q9UHQ4 241 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms