RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 AGAP20933 346 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 GABRB3P28472 473 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 SKIV2L2P42285 1042 aaKnown RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 CLCN7P51798 805 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 TAP2Q03519 686 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 CUL1Q13616 776 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 ZXDCQ2QGD7 858 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 KLHL38Q2WGJ6 581 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 ACSBG2Q5FVE4 666 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 PLAG1Q6DJT9 500 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 UGT3A1Q6NUS8 523 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 XKRXQ6PP77 449 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 NEK10Q6ZWH5 1172 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 GDF7Q7Z4P5 450 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 SLC26A11Q86WA9 606 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 IFT20Q8IY31 132 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 LRRC56Q8IYG6 542 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 SUN3Q8TAQ9 357 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF480Q8WV37 535 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 RERGQ96A58 199 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 PKP4Q99569 1192 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 SLC17A6Q9P2U8 582 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 GALPQ9UBC7 116 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 TAC3Q9UHF0 121 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 CORO1CQ9ULV4 474 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 DHRS7Q9Y394 339 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 CCDC168Q8NDH2 2452 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 NF1P21359 2839 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 F8P00451 2351 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 KCNE1BA0A087WTH5 132 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 TCRBV9S1A1TA0A576 114 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 P2RX6O15547 441 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 SLC19A2O60779 497 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 WISP2O76076 250 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 SLC16A8O95907 504 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
CKAP4-202ENST00000552828 RHOXF2BP0C7M4 288 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 SNRPNP63162 240 aaKnown RBP11.19□□□□□ -0.62
CKAP4-202ENST00000552828 RBPJQ06330 500 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF33BQ06732 778 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
CKAP4-202ENST00000552828 SYT16Q17RD7 645 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 STRA8Q7Z7C7 330 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 AMER2Q8N7J2 671 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 THAP3Q8WTV1 239 aaPredicted RBP11.19□□□□□ -0.62
CKAP4-202ENST00000552828 METTL21AQ8WXB1 218 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 ASB11Q8WXH4 323 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 LURAP1Q96LR2 239 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 CYTH2Q99418 400 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 FMO2Q99518 471 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 NDNQ99608 321 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 GPR21Q99679 349 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 RHOXF2Q9BQY4 288 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 TRIM8Q9BZR9 551 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 VN1R1Q9GZP7 353 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 TAS2R13Q9NYV9 303 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 TXNDC16Q9P2K2 825 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 TRMT6Q9UJA5 497 aaKnown RBP11.19□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 MED16Q9Y2X0 877 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 VWA7Q9Y334 891 aa11.19□□□□□ -0.62
CKAP4-202ENST00000552828 GFYI3L273 518 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 HAT1O14929 419 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 NSA2O95478 260 aaKnown RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 ENO3P13929 434 aaPredicted RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 HRH2P25021 359 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 STX2P32856 288 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 AVPR1BP47901 424 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 RIPPLY3P57055 190 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 GPX6P59796 221 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 ADORA2A-AS1P86434 159 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 NDUFA9Q16795 377 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 KRTCAP3Q53RY4 240 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF766Q5HY98 468 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 ACER2Q5QJU3 275 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 RBM20Q5T481 1227 aaKnown RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 Q6ZPB1 254 aaPredicted RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 VN1R4Q7Z5H5 301 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 CPEB2Q7Z5Q1 589 aaKnown RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 RELL1Q8IUW5 271 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 GPATCH11Q8N954 259 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 CD200R1Q8TD46 325 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 ADAMTS18Q8TE60 1221 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF354BQ96LW1 612 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 C19orf25Q9UFG5 118 aaPredicted RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 TSR3Q9UJK0 312 aaKnown RBP11.18□□□□□ -0.62
CKAP4-202ENST00000552828 PSAT1Q9Y617 370 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 MYO7BQ6PIF6 2116 aa11.18□□□□□ -0.62
CKAP4-202ENST00000552828 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 ASPDHA6ND91 283 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 FAM159BA6NKW6 160 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 A8MUI8 341 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 H7BY64 318 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 EIF3FO00303 357 aaPredicted RBP11.17□□□□□ -0.62
CKAP4-202ENST00000552828 SEC24DO94855 1032 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms