RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PTGER1P34995 402 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CD96P40200 585 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CETN2P41208 172 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 HNF4AP41235 474 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CA7P43166 264 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PNLIPRP1P54315 467 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 MPP1Q00013 466 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 GSTM4Q03013 218 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 TUBA3CQ13748 450 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF766Q5HY98 468 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PCID2Q5JVF3 399 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 THEMIS2Q5TEJ8 643 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 ABHD17BQ5VST6 288 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 ICE2Q659A1 982 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 TUBA3EQ6PEY2 450 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 TTC23LQ6PF05 361 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC13A5Q86YT5 568 aaPredicted RBP6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CPNE9Q8IYJ1 553 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 RPRMLQ8N4K4 120 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PRELID2Q8N945 189 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CCDC89Q8N998 374 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 THAP3Q8WTV1 239 aaPredicted RBP6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 HAS2Q92819 552 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 RELTQ969Z4 430 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC22A18Q96BI1 424 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PEX11GQ96HA9 241 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PANX2Q96RD6 677 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CYTH2Q99418 400 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 NDNQ99608 321 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 BAG1Q99933 345 aaPredicted RBP6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF700Q9H0M5 742 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 ATG10Q9H0Y0 220 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 LUC7LQ9NQ29 371 aaKnown RBP6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 GNPTGQ9UJJ9 305 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 NXT1Q9UKK6 140 aaKnown RBP6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 GUCA1BQ9UMX6 200 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 MED16Q9Y2X0 877 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 NEU2Q9Y3R4 380 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 NAV3Q8IVL0 2385 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 VPS13CQ709C8 3753 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 IGLV3-12A0A075B6K2 115 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 OR5H15A6NDH6 313 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 E7ENX8 843 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 QSOX1O00391 747 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 GAS8O95995 478 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 RPN2P04844 631 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 SERPIND1P05546 499 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ANXA5P08758 320 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CD63P08962 238 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 C8orf89P0DMQ9 161 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 FDFT1P37268 417 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 BCL6P41182 706 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 XCR1P46094 333 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 TTPAP49638 278 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CLCN7P51798 805 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 BTG2P78543 158 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 TIAL1Q01085 375 aaKnown RBP eCLIP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 OC90Q02509 493 aaPredicted RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 PLOD1Q02809 727 aaPredicted RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 TAP2Q03519 686 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 GBX1Q14549 363 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 SETDB1Q15047 1291 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 OR1C1Q15619 314 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 MAPKAPK3Q16644 382 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF630Q2M218 657 aaPredicted RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ZXDCQ2QGD7 858 aaPredicted RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ANKRD20A4Q4UJ75 823 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 SFT2D3Q587I9 215 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ACER2Q5QJU3 275 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 HP1BP3Q5SSJ5 553 aaPredicted RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 SEL1L2Q5TEA6 688 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF425Q6IV72 752 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CASC4Q6P4E1 433 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 TMEM205Q6UW68 189 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CYHR1Q6ZMK1 362 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CEP128Q6ZU80 1094 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 GSTA5Q7RTV2 222 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 GALNTL5Q7Z4T8 443 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CPEB2Q7Z5Q1 589 aaKnown RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ANKRD37Q7Z713 158 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC26A11Q86WA9 606 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CHERPQ8IWX8 916 aaKnown RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 LRRC56Q8IYG6 542 aaPredicted RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CPSF7Q8N684 471 aaKnown RBP6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF740Q8NDX6 193 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 OR51Q1Q8NH59 317 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 AGAP11Q8TF27 550 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 PYCR2Q96C36 320 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 LRRC45Q96CN5 670 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 TTC1Q99614 292 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 GPR21Q99679 349 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 UCK2Q9BZX2 261 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 DRC3Q9H069 523 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 SPNS1Q9H2V7 528 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 RHBGQ9H310 441 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CDCP1Q9H5V8 836 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 KCNK13Q9HB14 408 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 TNFRSF10DQ9UBN6 386 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 CPAMD8Q8IZJ3 1885 aa6.44□□□□□ -1.38
PRPF40B-214ENST00000551320 GTF3C1Q12789 2109 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms