RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 C16orf62Q7Z3J2 963 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SPATA19Q7Z5L4 167 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CALHM3Q86XJ0 350 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 TRIM48Q8IWZ4 208 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 HS3ST5Q8IZT8 346 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 OR8H2Q8N162 312 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 PGBD5Q8N414 524 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 DNAJC22Q8N4W6 341 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CERS5Q8N5B7 392 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 OR11H4Q8NGC9 324 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 OR8J3Q8NGG0 315 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 AGR3Q8TD06 166 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 NSMAFQ92636 917 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 DNASE1L2Q92874 299 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 RAD51AP1Q96B01 352 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ARMC5Q96C12 935 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 NXPE2Q96DL1 559 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CCDC126Q96EE4 140 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SCMH1Q96GD3 660 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SENP8Q96LD8 212 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 PPP1R36Q96LQ0 422 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 Q96MT0 163 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF583Q96ND8 569 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 COL21A1Q96P44 957 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ORAI2Q96SN7 254 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 AGAP2Q99490 1192 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 PIP5K1AQ99755 562 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 RHNO1Q9BSD3 238 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 C11orf84Q9BUA3 381 aaPredicted RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 HTATIP2Q9BUP3 242 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CINPQ9BW66 212 aaPredicted RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 APOL5Q9BWW9 433 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 AMNQ9BXJ7 453 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CDCA4Q9BXL8 241 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 BEX2Q9BXY8 128 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 GABARAPL3Q9BY60 117 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CCDC90BQ9GZT6 254 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 PRDM14Q9GZV8 571 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 PRDM12Q9H4Q4 367 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 TASP1Q9H6P5 420 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 RNF167Q9H6Y7 350 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 GAREM1Q9H706 876 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 NT5DC2Q9H857 520 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CAB39LQ9H9S4 337 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SEBOXQ9HB31 216 aaPredicted RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 FOLH1BQ9HBA9 442 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 EML4Q9HC35 981 aaKnown RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 FBRSL1Q9HCM7 1045 aaKnown RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ATP13A1Q9HD20 1204 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 EQTNQ9NQ60 294 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ACSS2Q9NR19 701 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 GSN-AS1Q9NRJ2 163 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 OLA1Q9NTK5 396 aaKnown RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 EXD2Q9NVH0 621 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 AIG1Q9NVV5 245 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 HPF1Q9NWY4 346 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SDHAF2Q9NX18 166 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 NSMCE4AQ9NXX6 385 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 VNN3Q9NY84 501 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ERAP1Q9NZ08 941 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 ACTR10Q9NZ32 417 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 XPR1Q9UBH6 696 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SUSD2Q9UGT4 822 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 UBQLN2Q9UHD9 624 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 LEF1Q9UJU2 399 aaPredicted RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 GABRQQ9UN88 632 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 INVSQ9Y283 1065 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 SAMHD1Q9Y3Z3 626 aaKnown RBP5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 CDH10Q9Y6N8 788 aa5.11□□□□□ -1.59
LSM3P2-201ENST00000551246 TRBV5-3A0A0A0MS03 114 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 A0A0U1RQF3 1178 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 A0A1B0GTQ1 180 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 SCO2A0A1W2PP80 73 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 A0A1W2PPL8 197 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 FAM234BA2RU67 622 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 MTMR11A4FU01 709 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 RRN3P2A6NIE6 340 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 ASB14A6NK59 587 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 EFCAB7A8K855 629 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 ERI2A8K979 691 aaKnown RBP5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 A8MT66 165 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 SMLR1H3BR10 107 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 NR5A2O00482 541 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 NFIBO00712 420 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 SYN3O14994 580 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC16A4O15374 487 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 FABP7O15540 132 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 SSX5O60225 188 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 KIAA0513O60268 411 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 NOBOXO60393 691 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 HUS1O60921 280 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 MITFO75030 526 aaPredicted RBP5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 VPS4BO75351 444 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 NDUFS6O75380 124 aaKnown RBP5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 SNAPC5O75971 98 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 C1RP00736 705 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 IGHV2-70P01814 119 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 MT-ND1P03886 318 aa5.1□□□□□ -1.59
LSM3P2-201ENST00000551246 ACAA1P09110 424 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms