RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CTNNA1P35221 906 aaKnown RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 THBS4P35443 961 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 HSPA9P38646 679 aaKnown RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CD86P42081 329 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 ARRB1P49407 418 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SUOXP51687 545 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 MAZP56270 477 aaKnown RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SRP54P61011 504 aaKnown RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 B4GALNT1Q00973 533 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 BCL2L1Q07817 233 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 ELP6Q0PNE2 266 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 LAMB3Q13751 1172 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 GALNT3Q14435 633 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 PTPRCAPQ14761 206 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 ACOX1Q15067 660 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 PDK2Q15119 407 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 RBMS2Q15434 407 aaKnown RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SOWAHCQ53LP3 525 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 C10orf25Q5T742 122 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 KCTD11Q693B1 232 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 PNCKQ6P2M8 343 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 BBS12Q6ZW61 710 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 EFL1Q7Z2Z2 1120 aaKnown RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 NT5DC3Q86UY8 548 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 ZSCAN30Q86W11 494 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 TMPRSS12Q86WS5 348 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CCDC13Q8IYE1 715 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 KATNAL2Q8IYT4 538 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 ZNF567Q8N184 647 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 NRACQ8N912 160 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 GLIS1Q8NBF1 620 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 LMX1AQ8TE12 382 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CTNNBL1Q8WYA6 563 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 HAUS1Q96CS2 278 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 NUS1Q96E22 293 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 FEM1CQ96JP0 617 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 NRTNQ99748 197 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 ADGRE3Q9BY15 652 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 TWSG1Q9GZX9 223 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 PRORYQ9H606 182 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 OGFRQ9NZT2 677 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 TMEM9Q9P0T7 183 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SEMA5BQ9P283 1151 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SLC23A2Q9UGH3 650 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SUFUQ9UMX1 484 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 PACSIN2Q9UNF0 486 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 RNF215Q9Y6U7 377 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SPTA1P02549 2419 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 LOC285095A0A1B0GVY8 99 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CLCA1A8K7I4 914 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 F5H423 210 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 GOLGA6L19H0YKK7 550 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 PSMD11O00231 422 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 SOCS2O14508 198 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 B4GAT1O43505 415 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CSO75390 466 aaKnown RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 JCHAINP01591 159 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 IVLP07476 585 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 PRF1P14222 555 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 PSMA3P25788 255 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CTNNA2P26232 953 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 SERPINB6P35237 376 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 EIF2S3P41091 472 aaKnown RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 SPINT3P49223 89 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 HNRNPKP61978 463 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 DYNLT1P63172 113 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CCL7P80098 99 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CCZ1BP86790 482 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CCZ1P86791 482 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 TLE3Q04726 772 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ZFP36L1Q07352 338 aaKnown RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 GPS1Q13098 491 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ILKQ13418 452 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ZNF235Q14590 738 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 KPNB1Q14974 876 aaKnown RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 C16orf72Q14CZ0 275 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ISXQ2M1V0 245 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 COL28A1Q2UY09 1125 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 PYCR3Q53H96 274 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ARMC12Q5T9G4 340 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 MARC1Q5VT66 337 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 AWAT2Q6E213 333 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ABLIM2Q6H8Q1 611 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 C19orf48Q6RUI8 117 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 BMPERQ8N8U9 685 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 LPCAT1Q8NF37 534 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 OR56A4Q8NGH8 313 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CXorf40AQ8TE69 158 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 IGFBPL1Q8WX77 278 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 ATXN7L3BQ96GX2 97 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 PANX2Q96RD6 677 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 CCDC3Q9BQI4 270 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 NUDT22Q9BRQ3 303 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 RIOK2Q9BVS4 552 aaKnown RBP4.75□□□□□ -1.65
SCAF11-214ENST00000550893 SPRY4Q9C004 299 aa4.75□□□□□ -1.65
SCAF11-214ENST00000550893 POLR1EQ9GZS1 481 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms