RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OR5T3Q8NGG3 340 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 PEX11GQ96HA9 241 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 IMMP1LQ96LU5 166 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 MAGEB10Q96LZ2 347 aaPredicted RBP15.42■□□□□ 0.06
VPS29-207ENST00000549970 EGFL8Q99944 293 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 SARGQ9BW04 601 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 RHOJQ9H4E5 214 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 DYRK1BQ9Y463 629 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 SLC22A7Q9Y694 548 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 SCN2AQ99250 2005 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 CPAMD8Q8IZJ3 1885 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 B3GALT4O96024 378 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 CYC1P08574 325 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 SCTRP47872 440 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 TNFSF10P50591 281 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 OLR1P78380 273 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 RGS1Q08116 209 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 C2orf54Q08AI8 447 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 CALCOCO2Q13137 446 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 PWP1Q13610 501 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 BTBD16Q32M84 506 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 DEFB134Q4QY38 66 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 FRA10AC1Q70Z53 315 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 ANKRD37Q7Z713 158 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 CEP97Q8IW35 865 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 PYROXD1Q8WU10 500 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 ANKRD49Q8WVL7 239 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 FAR1Q8WVX9 515 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 HAS2Q92819 552 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 VPS39Q96JC1 886 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 UNKQ9C0B0 810 aaKnown RBP15.41■□□□□ 0.06
VPS29-207ENST00000549970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.41■□□□□ 0.06
VPS29-207ENST00000549970 GPAMQ9HCL2 828 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 SAYSD1Q9NPB0 183 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 SMYD2Q9NRG4 433 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 NSMCE4AQ9NXX6 385 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 SLC22A14Q9Y267 594 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 ZGRF1Q86YA3 2104 aa15.41■□□□□ 0.06
VPS29-207ENST00000549970 TRAV17A0A0B4J275 112 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 FAM187AA6NFU0 413 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 E2F3O00716 465 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 RAD51CO43502 376 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 GALR3O60755 368 aaPredicted RBP15.4■□□□□ 0.06
VPS29-207ENST00000549970 DDAH2O95865 285 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 WDPCPO95876 746 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 ZNF888P0CJ79 500 aaPredicted RBP15.4■□□□□ 0.06
VPS29-207ENST00000549970 ALOX12P18054 663 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 SSTR1P30872 391 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 AGTR2P50052 363 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 SLC12A2P55011 1212 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 REEP5Q00765 189 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 ZNF33BQ06732 778 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 TSNQ15631 228 aaKnown RBP15.4■□□□□ 0.06
VPS29-207ENST00000549970 ABHD17BQ5VST6 288 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 AFAP1L2Q8N4X5 818 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 SPATA4Q8NEY3 305 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 C5orf34Q96MH7 638 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 AIF1LQ9BQI0 150 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 ERP44Q9BS26 406 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 PELI2Q9HAT8 420 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 WHRNQ9P202 907 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 CTNNAL1Q9UBT7 734 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 ZFP69BQ9UJL9 534 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 SLC5A6Q9Y289 635 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 OARD1Q9Y530 152 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 POLEQ07864 2286 aa15.4■□□□□ 0.06
VPS29-207ENST00000549970 CTAGE15A4D2H0 777 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 A8MUI8 341 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 DNAJB6O75190 326 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 EDN3P14138 238 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 AHRP35869 848 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 HNF4AP41235 474 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 SKP1P63208 163 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 RHAGQ02094 409 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 ABRAXAS2Q15018 415 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 RBBP5Q15291 538 aaKnown RBP15.39■□□□□ 0.05
VPS29-207ENST00000549970 NSDHLQ15738 373 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 C18orf21Q32NC0 220 aaPredicted RBP15.39■□□□□ 0.05
VPS29-207ENST00000549970 C4orf17Q53FE4 359 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 FCRLBQ6BAA4 426 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 PLAG1Q6DJT9 500 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 RPUSD3Q6P087 351 aaKnown RBP15.39■□□□□ 0.05
VPS29-207ENST00000549970 NXPE4Q6UWF7 544 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 ABHD13Q7L211 337 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 MAATS1Q7Z4T9 603 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 ADAMTSL2Q86TH1 951 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 CTAGE6Q86UF2 777 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 BCORP1Q8N888 145 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 ANKRD53Q8N9V6 530 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 NT5CQ8TCD5 201 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 TSLPQ969D9 159 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 OR1F2PQ96R84 312 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 MCMBPQ9BTE3 642 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 CAB39LQ9H9S4 337 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 LANCL2Q9NS86 450 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 OLAHQ9NV23 265 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 STMN3Q9NZ72 180 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 TXNDC16Q9P2K2 825 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 TEKT2Q9UIF3 430 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms