RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 FAM219BQ5XKK7 198 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 SLC6A19Q695T7 634 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 JMJD6Q6NYC1 403 aaPredicted RBP9.25□□□□□ -0.93
HDAC7-229ENST00000549883 VN1R5Q7Z5H4 357 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 RELL1Q8IUW5 271 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.25□□□□□ -0.93
HDAC7-229ENST00000549883 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
HDAC7-229ENST00000549883 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
HDAC7-229ENST00000549883 AFAP1L2Q8N4X5 818 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 MNS1Q8NEH6 495 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 KIF18AQ8NI77 898 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 CREB3L4Q8TEY5 395 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 PEX11GQ96HA9 241 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 IP6K3Q96PC2 410 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 ATOH8Q96SQ7 321 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 TGIF2Q9GZN2 237 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 VN1R1Q9GZP7 353 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 ACSS3Q9H6R3 686 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 PELI2Q9HAT8 420 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 MKKSQ9NPJ1 570 aaPredicted RBP9.25□□□□□ -0.93
HDAC7-229ENST00000549883 ATP13A2Q9NQ11 1180 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 SNX15Q9NRS6 342 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 WWOXQ9NZC7 414 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 CD274Q9NZQ7 290 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 ZFP69BQ9UJL9 534 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 PTBP2Q9UKA9 531 aaKnown RBP9.25□□□□□ -0.93
HDAC7-229ENST00000549883 MKL2Q9ULH7 1088 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 NFU1Q9UMS0 254 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 ZNF451Q9Y4E5 1061 aa9.25□□□□□ -0.93
HDAC7-229ENST00000549883 TENM4Q6N022 2769 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 IGHV1-45A0A0A0MS14 117 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 FAM227AF5H4B4 570 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 H0YIG0 161 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 GALR3O60755 368 aaPredicted RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 CDC123O75794 336 aaPredicted RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 SORBS2O94875 1100 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 HEXBP07686 556 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 LTA4HP09960 611 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 RHOXF2BP0C7M4 288 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 C1GALT1C1LP0DN25 315 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 MTHFD2P13995 350 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 HNRNPH1P31943 449 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 GRK3P35626 688 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 GGT5P36269 586 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 HNMTP50135 292 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 ST13P50502 369 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 SOX8P57073 446 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 ATP6V0D1P61421 351 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 FOXK1P85037 733 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 CDC16Q13042 620 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 AIMP2Q13155 320 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 NAB1Q13506 487 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 PCOLCEQ15113 449 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 PLEKHN1Q494U1 663 aaPredicted RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 MINDY4Q4G0A6 757 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 TOR1AIP1Q5JTV8 583 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 VWA5B1Q5TIE3 1220 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 SULT1C3Q6IMI6 304 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 SNX31Q8N9S9 440 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 PDPRQ8NCN5 879 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 NT5CQ8TCD5 201 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 UTP15Q8TED0 518 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 PSMF1Q92530 271 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 TSLPQ969D9 159 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 THOC3Q96J01 351 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 GPR78Q96P69 363 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 FMO2Q99518 471 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 AIF1LQ9BQI0 150 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 RHOXF2Q9BQY4 288 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 FUT8Q9BYC5 575 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 SLC6A16Q9GZN6 736 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 ANKHQ9HCJ1 492 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 LANCL2Q9NS86 450 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 DNAJC11Q9NVH1 559 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 MTRF1LQ9UGC7 380 aaKnown RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 ZNF490Q9ULM2 529 aaPredicted RBP9.24□□□□□ -0.93
HDAC7-229ENST00000549883 SLC22A7Q9Y694 548 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 KCNE2Q9Y6J6 123 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 MYO18BQ8IUG5 2567 aa9.24□□□□□ -0.93
HDAC7-229ENST00000549883 LOC102723996A0A087X1L8 192 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 A0A096LPK6 155 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 TTLL8A6PVC2 850 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SUPT3HB4E1H0 165 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 POC1B-GALNT4F8VUJ3 575 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 KIF2AO00139 706 aaPredicted RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 MAP2K7O14733 419 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 CHST10O43529 356 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 CCNT2O60583 730 aaKnown RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 B4GALT2O60909 372 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 KERAO60938 352 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SH3BGRLO75368 114 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SUPT3HO75486 399 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 STK16O75716 305 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SEC24DO94855 1032 aaPredicted RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 HPP00738 406 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 IGHEP01854 428 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SLC35G6P0C7Q6 338 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SMIM10L1P0DMW3 83 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 ITGAMP11215 1152 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms