RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SBSNQ6UWP8 590 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 GDPD4Q6W3E5 623 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 UBE2R2Q712K3 238 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 TTC29Q8NA56 475 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 GOLM1Q8NBJ4 401 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 SMG7Q92540 1137 aaKnown RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 LRIG1Q96JA1 1093 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 PHOX2BQ99453 314 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 SPASTQ9UBP0 616 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 FAM32AQ9Y421 112 aaKnown RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 IGLV3-16A0A075B6K0 115 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 GLYATL1P3A0A0U1RQE8 302 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 TMEM202A6NGA9 273 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 STK16O75716 305 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 OTCP00480 354 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 POLR2EP19388 210 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 MSH3P20585 1137 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CLK3P49761 638 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF691Q5VV52 312 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 EFL1Q7Z2Z2 1120 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 ANKRD13BQ86YJ7 626 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 ETFBKMTQ8IXQ9 262 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 DPP10Q8N608 796 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 VN1R2Q8NFZ6 395 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CYB5D2Q8WUJ1 264 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 ING5Q8WYH8 240 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 MROQ9BYG7 248 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 RMI1Q9H9A7 625 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 SFXN1Q9H9B4 322 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 SCN3BQ9NY72 215 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 SCN2AQ99250 2005 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 TTC36A6NLP5 189 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 LHCGRP22888 699 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 POLR2LP62875 67 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 VLDLRP98155 873 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 MXD1Q05195 221 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 DMPKQ09013 629 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 SHHQ15465 462 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 GAB4Q2WGN9 574 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 Q6ZVU0 165 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CCDC103Q8IW40 242 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CHST14Q8NCH0 376 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 GPR26Q8NDV2 337 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 OR5K1Q8NHB7 308 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 DOK4Q8TEW6 326 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CDCA3Q99618 268 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CHCHD6Q9BRQ6 235 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 REXO4Q9GZR2 422 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 BRD9Q9H8M2 597 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 AKIP1Q9NQ31 210 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 NFKBIL1Q9UBC1 381 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 DKK3Q9UBP4 350 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 WDR37Q9Y2I8 494 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 PLXNB3Q9ULL4 1909 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 EFCAB9A8MZ26 197 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 TFECO14948 347 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 RGS14O43566 566 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 HIST1H2AGP0C0S8 130 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 HIST1H2ADP20671 130 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CRISP3P54108 245 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CHIT1Q13231 466 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 NAE1Q13564 534 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 CCDC92Q53HC0 331 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 IRAK1BP1Q5VVH5 260 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 LRRC66Q68CR7 880 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF551Q7Z340 670 aaPredicted RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 NXPE1Q8N323 547 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 TSPEARQ8WU66 669 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 HIST1H2AHQ96KK5 128 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 ASB16Q96NS5 453 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 HIST1H2AJQ99878 128 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 H2AFJQ9BTM1 129 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 KAT8Q9H7Z6 458 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 TRIM39Q9HCM9 518 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 HEBP1Q9NRV9 189 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 DCAF13Q9NV06 445 aaKnown RBP10.69□□□□□ -0.7
LINC00661-204ENST00000549354 C14orf119Q9NWQ9 140 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 SLC6A14Q9UN76 642 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 MAP4K5Q9Y4K4 846 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 SEC16AO15027 2179 aa10.69□□□□□ -0.7
LINC00661-204ENST00000549354 MUC22E2RYF6 1773 aaPredicted RBP10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ANTXRLA6NF34 631 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SSX4O60224 188 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ALPPL2P10696 532 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ADH5P11766 374 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SPNP16150 400 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF30P17039 623 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ENGP17813 658 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SDHBP21912 280 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ALDH9A1P49189 494 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ARHGDIAP52565 204 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 MC1RQ01726 317 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 IRF8Q02556 426 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 GBX1Q14549 363 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 XKR6Q5GH73 641 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 TMEM184AQ6ZMB5 413 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 PLEKHG7Q6ZR37 379 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 P3H2Q8IVL5 708 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 DTX3Q8N9I9 347 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms