RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 NPAS2Q99743 824 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 HAUS8Q9BT25 410 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 AARSD1Q9BTE6 412 aaKnown RBP12.1□□□□□ -0.47
PTCH1-218ENST00000548945 SGPP1Q9BX95 441 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 TRIM8Q9BZR9 551 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 PARVBQ9HBI1 364 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 LANCL2Q9NS86 450 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 SH3BGRL2Q9UJC5 107 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 FBXO5Q9UKT4 447 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 PDE10AQ9Y233 779 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
PTCH1-218ENST00000548945 INTS1Q8N201 2190 aaKnown RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 LCMT2O60294 686 aaKnown RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 RDH16O75452 317 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 SSTR2P30874 369 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 COILP38432 576 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 VPS41P49754 854 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 RIPPLY3P57055 190 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 MEF2AQ02078 507 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 ACTN3Q08043 901 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 SLC26A11Q86WA9 606 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 SIAH3Q8IW03 269 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 MFSD9Q8NBP5 474 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 KCT2Q8NC54 265 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 ABHD11Q8NFV4 315 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 GABPB2Q8TAK5 448 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 ZCCHC10Q8TBK6 192 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 ADAMTS18Q8TE60 1221 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 FRMD6Q96NE9 622 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 MACROD1Q9BQ69 325 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 GPAMQ9HCL2 828 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 LZTFL1Q9NQ48 299 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 C20orf96Q9NUD7 363 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 TAS2R13Q9NYV9 303 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 TRMT6Q9UJA5 497 aaKnown RBP12.09□□□□□ -0.47
PTCH1-218ENST00000548945 MEMO1Q9Y316 297 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 NAALAD2Q9Y3Q0 740 aa12.09□□□□□ -0.47
PTCH1-218ENST00000548945 FEZF1A0PJY2 475 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 OR2W5A6NFC9 320 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 FAM227AF5H4B4 570 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 NEURL1O76050 574 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 WISP2O76076 250 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 HAUS5O94927 633 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 CLDN14O95500 239 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SP1P08047 785 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 CCDC175P0C221 793 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 CDH1P12830 882 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 NPPBP16860 134 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 JAK1P23458 1154 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 CCR8P51685 355 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 TERF1P54274 439 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SLC26A5P58743 744 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SRSF11Q05519 484 aaKnown RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 NAE1Q13564 534 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 PWP1Q13610 501 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SPINK14Q6IE38 97 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SLC25A25Q6KCM7 469 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 STRA8Q7Z7C7 330 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SHISA5Q8N114 240 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 EID3Q8N140 333 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 MYO1HQ8N1T3 1032 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 GHDCQ8N2G8 530 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 TBC1D19Q8N5T2 526 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 C2CD4AQ8NCU7 369 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 OR4K1Q8NGD4 311 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 ELP5Q8TE02 316 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 PHF10Q8WUB8 498 aaKnown RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 EEF1AKMT1Q8WVE0 214 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 TBC1D20Q96BZ9 403 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 MTFMTQ96DP5 389 aaKnown RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SIGLEC10Q96LC7 697 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 OLFM1Q99784 485 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 TRIM51Q9BSJ1 452 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 HES7Q9BYE0 225 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 TRIM45Q9H8W5 580 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 CLK4Q9HAZ1 481 aaKnown RBP12.08□□□□□ -0.48
PTCH1-218ENST00000548945 KLHL1Q9NR64 748 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 LRFN1Q9P244 771 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 ADAMTS6Q9UKP5 1117 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 SH2B3Q9UQQ2 575 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 MAD1L1Q9Y6D9 718 aa12.08□□□□□ -0.48
PTCH1-218ENST00000548945 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 TRBC2A0A5B9 178 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 NPIPA5E9PKD4 350 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 NDC80O14777 642 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ASNA1O43681 348 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 MAN1A2O60476 641 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 GALR3O60755 368 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 FHP07954 510 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 F7P08709 466 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 HIST1H2AGP0C0S8 130 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 HIST1H2ADP20671 130 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 CAPN3P20807 821 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms