RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 CSTF1Q05048 431 aaKnown RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 DMPKQ09013 629 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 LY6DQ14210 128 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 MED22Q15528 200 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 TBCEQ15813 527 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 ARID3BQ8IVW6 561 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 FBXO16Q8IX29 292 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 CPXCR1Q8N123 301 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 VANGL1Q8TAA9 524 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 SPATA18Q8TC71 538 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 OR2A14Q96R47 310 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 FNBP1Q96RU3 617 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 MTG1Q9BT17 334 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 ARRDC1-AS1Q9H2J1 176 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 PLK3Q9H4B4 646 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 TEX10Q9NXF1 929 aaPredicted RBP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 AATFQ9NY61 560 aaKnown RBP eCLIP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 PCDHGA5Q9Y5G8 931 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.19□□□□□ -1.9
CNOT2-216ENST00000548939 TENM4Q6N022 2769 aa3.19□□□□□ -1.9
CNOT2-216ENST00000548939 DOPEY1Q5JWR5 2465 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 MCM3APO60318 1980 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 TANC1Q9C0D5 1861 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 MYO9AB2RTY4 2548 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 TO15178 435 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 BAG3O95817 575 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 HPRP00739 348 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 CXCL10P02778 98 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 MMP1P03956 469 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 PRB1P04280 392 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 CLEC3BP05452 202 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 SRPRAP08240 638 aaKnown RBP3.18□□□□□ -1.9
CNOT2-216ENST00000548939 CA8P35219 290 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 PDX1P52945 283 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 CNTN2Q02246 1040 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 BTG3Q14201 252 aaPredicted RBP3.18□□□□□ -1.9
CNOT2-216ENST00000548939 GPNMBQ14956 572 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 SEL1L3Q68CR1 1132 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 NCEH1Q6PIU2 408 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 CFAP77Q6ZQR2 320 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 FAM133AQ8N9E0 248 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 OR6J1Q8NGC5 347 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 TBC1D17Q9HA65 648 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 AMACRQ9UHK6 382 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 ISY1Q9ULR0 285 aaKnown RBP3.18□□□□□ -1.9
CNOT2-216ENST00000548939 NENFQ9UMX5 172 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 CRYL1Q9Y2S2 319 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 DDX49Q9Y6V7 483 aaKnown RBP3.18□□□□□ -1.9
CNOT2-216ENST00000548939 DMXL2Q8TDJ6 3036 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 ANKRD17O75179 2603 aaKnown RBP3.18□□□□□ -1.9
CNOT2-216ENST00000548939 NLRC5Q86WI3 1866 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 RAD50Q92878 1312 aa3.18□□□□□ -1.9
CNOT2-216ENST00000548939 SPTAN1Q13813 2472 aaKnown RBP3.17□□□□□ -1.9
CNOT2-216ENST00000548939 MICAL3Q7RTP6 2002 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 ASB14A6NK59 587 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 C5orf67F2Z3F1 127 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 HS6ST1O60243 411 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 DNAJB1P25685 340 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 ADORA1P30542 326 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 CCR9P51686 369 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 C15orf32Q32M92 178 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 SPOUT1Q5T280 376 aaKnown RBP3.17□□□□□ -1.9
CNOT2-216ENST00000548939 GORABQ5T7V8 394 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 C20orf194Q5TEA3 1177 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 GKAP1Q5VSY0 366 aaPredicted RBP3.17□□□□□ -1.9
CNOT2-216ENST00000548939 LYSMD4Q5XG99 296 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 BTN2A1Q7KYR7 527 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 CPLX4Q7Z7G2 160 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 NUP37Q8NFH4 326 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 SEPT8Q92599 483 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 TOP1MTQ969P6 601 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 NSUN4Q96CB9 384 aaKnown RBP3.17□□□□□ -1.9
CNOT2-216ENST00000548939 TEX13BQ9BXU2 312 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 S1PR5Q9H228 398 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 POMKQ9H5K3 350 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 SH2D4AQ9H788 454 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 PAG1Q9NWQ8 432 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 PDP2Q9P2J9 529 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 CMAHPQ9Y471 501 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 ASXL3Q9C0F0 2248 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 AKAP13Q12802 2813 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 ATG2AQ2TAZ0 1938 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 ADGRA3Q8IWK6 1321 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 TEX15Q9BXT5 2789 aa3.17□□□□□ -1.9
CNOT2-216ENST00000548939 RSPH10B2B2RC85 870 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 ZBED4O75132 1171 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 RSPH10BP0C881 870 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 IGHV4-31P0DP07 118 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 CDH2P19022 906 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 CAMPP49913 170 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 NOVA1P51513 510 aaKnown RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 TRA2BP62995 288 aaKnown RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 IKQ13123 557 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 MELKQ14680 651 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 ASTE1Q2TB18 679 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 BEND3Q5T5X7 828 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 PLPP4Q5VZY2 271 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 JADE1Q6IE81 842 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms