RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LACTB2Q53H82 288 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-227ENST00000548080 SLCO4C1Q6ZQN7 724 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 CHSY3Q70JA7 882 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 ZFAND4Q86XD8 727 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 SLC5A11Q8WWX8 675 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 NEIL2Q969S2 332 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 CCDC106Q9BWC9 280 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 C1GALT1Q9NS00 363 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 SEMA5BQ9P283 1151 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 ARMCX1Q9P291 453 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 A0A0J9YY10 115 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 SLC28A1O00337 649 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 UBDO15205 165 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 NRP2O60462 931 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 ZBTB11O95625 1053 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 C1GALT1C1LP0DN25 315 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 LBPP18428 481 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 MAGP20916 626 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 MLLT3P42568 568 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 HNRNPH2P55795 449 aaKnown RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 BNIP1Q12981 228 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 KIAA1614Q5VZ46 1190 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 TMEM198Q66K66 360 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 ATG9BQ674R7 924 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 GRHL2Q6ISB3 625 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 NXPE4Q6UWF7 544 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 CPSF7Q8N684 471 aaKnown RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 C19orf47Q8N9M1 422 aaKnown RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 WDR34Q96EX3 536 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 PTCD3Q96EY7 689 aaKnown RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 CATSPER2Q96P56 530 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 DCBLD2Q96PD2 775 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 TAAR9Q96RI9 348 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 TUBB6Q9BUF5 446 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 TWSG1Q9GZX9 223 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 EHD1Q9H4M9 534 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 ELOVL6Q9H5J4 265 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 FAM60AQ9NP50 221 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 THSD1Q9NS62 852 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 ZNF490Q9ULM2 529 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 G3BP2Q9UN86 482 aaKnown RBP16.63■□□□□ 0.25
HDAC7-227ENST00000548080 AHCTF1Q8WYP5 2266 aa16.63■□□□□ 0.25
HDAC7-227ENST00000548080 CAPN14A8MX76 684 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 B4E171 279 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 HCRTR1O43613 425 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 PRICKLE3O43900 615 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 CD22P20273 847 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 TSPAN7P41732 249 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 HSD11B2P80365 405 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 ZNF33BQ06732 778 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 SF1Q15637 639 aaKnown RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 SLC5A12Q1EHB4 618 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 SGO1Q5FBB7 561 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 FRG2Q64ET8 278 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 Q6ZSR9 355 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 TRIM46Q7Z4K8 759 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 TMPRSS11BQ86T26 416 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 C17orf64Q86WR6 236 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 D2HGDHQ8N465 521 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 OR2T11Q8NH01 316 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 MTFMTQ96DP5 389 aaKnown RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 ZNF578Q96N58 590 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 FRG2BQ96QU4 278 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 EFCAB11Q9BUY7 163 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 FARSBQ9NSD9 589 aaKnown RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 TAC3Q9UHF0 121 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 ZMIZ1Q9ULJ6 1067 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 SH2B3Q9UQQ2 575 aa16.62■□□□□ 0.25
HDAC7-227ENST00000548080 URB1O60287 2271 aaKnown RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 ANKRD11Q6UB99 2663 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-227ENST00000548080 TEX51A0A1B0GUA7 166 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 SERTM1A2A2V5 107 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 H0YIV9 168 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 POLR1CO15160 346 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-227ENST00000548080 RGS14O43566 566 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 ATP5HO75947 161 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 TIAF1O95411 115 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 PDYNP01213 254 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 CTSBP07858 339 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 PRR35P0CG20 571 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 VARSP26640 1264 aaKnown RBP16.61■□□□□ 0.25
HDAC7-227ENST00000548080 GRIA3P42263 894 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 DMTNQ08495 405 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 PAGE2BQ5JRK9 111 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 CATSPEREQ5SY80 951 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 DCAF12Q5T6F0 453 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 IGF2-ASQ6U949 168 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 PROSER1Q86XN7 944 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 TREML1Q86YW5 311 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 SELENOMQ8WWX9 145 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 FGF11Q92914 225 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 NSL1Q96IY1 281 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 ZNF385DQ9H6B1 395 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 FGF21Q9NSA1 209 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 TXLNGQ9NUQ3 528 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 MRGBPQ9NV56 204 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 ARL8BQ9NVJ2 186 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 DKK4Q9UBT3 224 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 GIMAP2Q9UG22 337 aa16.61■□□□□ 0.25
HDAC7-227ENST00000548080 CCL27Q9Y4X3 112 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms