RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 MFSD9Q8NBP5 474 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 GPR156Q8NFN8 814 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 CLHC1Q8NHS4 586 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 C16orf78Q8WTQ4 265 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 PPCDCQ96CD2 204 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF764Q96H86 408 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 PPM1MQ96MI6 270 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 CCDC115Q96NT0 180 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 PANX1Q96RD7 426 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 EBPLQ9BY08 206 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 FOXQ1Q9C009 403 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 OR51B5Q9H339 312 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 XKR8Q9H6D3 395 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 CD93Q9NPY3 652 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 SCHIP1Q9P0W5 487 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 CPNE7Q9UBL6 633 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 VPS4AQ9UN37 437 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 DOLKQ9UPQ8 538 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 SH2B3Q9UQQ2 575 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 INVSQ9Y283 1065 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 GMEB1Q9Y692 573 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 TNFSF14O43557 240 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 SCELO95171 688 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 EPN2O95208 641 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 KLK1P06870 262 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 DRD2P14416 443 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF10P21506 573 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 MAPK12P53778 367 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 SESN3P58005 492 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 HNRNPKP61978 463 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 RAE1P78406 368 aaKnown RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 MEF2AQ02078 507 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 TFF2Q03403 129 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 RGS1Q08116 209 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 SIM2Q14190 667 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 TEAD4Q15561 434 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 FXNQ16595 210 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 TMEM31Q5JXX7 168 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 FAM219BQ5XKK7 198 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 OR4C11Q6IEV9 310 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 OOSP2Q86WS3 158 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 NRROSQ86YC3 692 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 PQLC1Q8N2U9 271 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 OR2T12Q8NG77 320 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 OR52E4Q8NGH9 312 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 CDC26Q8NHZ8 85 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 FAM120BQ96EK7 910 aaKnown RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 PHF12Q96QT6 1004 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 SLC39A3Q9BRY0 314 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 DPH7Q9BTV6 452 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 REXO4Q9GZR2 422 aaKnown RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 PAIP1Q9H074 479 aaKnown RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 GORASP2Q9H8Y8 452 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 UCK1Q9HA47 277 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 MIEF1Q9NQG6 463 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 C8orf4Q9NR00 106 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 ARMC1Q9NVT9 282 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 SH3BP4Q9P0V3 963 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF282Q9UDV7 671 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 APOBEC3BQ9UH17 382 aaKnown RBP12.87□□□□□ -0.35
PTCH1-215ENST00000547672 C15orf41Q9Y2V0 281 aa12.87□□□□□ -0.35
PTCH1-215ENST00000547672 ELOVL7A1L3X0 281 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 CASQ2O14958 399 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 NDUFS4O43181 175 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 LRATO95237 230 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ETHE1O95571 254 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 CSF2P04141 144 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ACADSP16219 412 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 BIRC2Q13490 618 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 UGT8Q16880 541 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 SLC5A12Q1EHB4 618 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 HKDC1Q2TB90 917 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 CMPK2Q5EBM0 449 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 PRRT3Q5FWE3 981 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 RABL3Q5HYI8 236 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 WLSQ5T9L3 541 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 OR4F3Q6IEY1 312 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 FAM71E1Q6IPT2 247 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF425Q6IV72 752 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF621Q6ZSS3 439 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 SERPINA11Q86U17 422 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ADGRF3Q8IZF5 1079 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF740Q8NDX6 193 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 ADCY4Q8NFM4 1077 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms