RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CDKN1AP38936 164 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 MNDAP41218 407 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 OR3A1P47881 315 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ZP1P60852 638 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SSTP61278 116 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 PDE1BQ01064 536 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 MBTD1Q05BQ5 628 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 CACNG1Q06432 222 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SLC3A1Q07837 685 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 GPM6BQ13491 265 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ZKSCAN8Q15776 578 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 KIF19Q2TAC6 998 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 RABL6Q3YEC7 729 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 CFAP157Q5JU67 520 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 WASHC2DQ5SRD0 308 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 GRTP1Q5TC63 336 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 FAM166AQ6J272 317 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 FBXL22Q6P050 247 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SIGLEC15Q6ZMC9 328 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 C15orf52Q6ZUT6 534 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SLC16A9Q7RTY1 509 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 DGLUCYQ7Z3D6 616 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 CTU1Q7Z7A3 348 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 LAX1Q8IWV1 398 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 THEM5Q8N1Q8 247 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 RNF148Q8N7C7 305 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 NOA1Q8NC60 698 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 OR4K1Q8NGD4 311 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 OR52M1Q8NGK5 317 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 MAGEC3Q8TD91 643 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 U2AF1L4Q8WU68 220 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 GGHQ92820 318 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 RFT1Q96AA3 541 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ESAMQ96AP7 390 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ULK4Q96C45 1275 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 TXNDC15Q96J42 360 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 FAM71F1Q96KD3 344 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 TRMT61BQ9BVS5 477 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ACPTQ9BZG2 426 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 TRPV6Q9H1D0 765 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 LRMDAQ9H2I8 198 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 C6orf106Q9H6K1 298 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 KRCC1Q9NPI7 259 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 HOMER3Q9NSC5 361 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 B3GAT1Q9P2W7 334 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 WDR83OSQ9Y284 106 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 TCOF1Q13428 1488 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SYNMO15061 1565 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 VWDEQ8N2E2 1590 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 NEURL4Q96JN8 1562 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 PFASO15067 1338 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PTPRGP23470 1445 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 POGZQ7Z3K3 1410 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 UACAQ9BZF9 1416 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 ZFYVE16Q7Z3T8 1539 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 DOCK7Q96N67 2140 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CDK12Q9NYV4 1490 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 hDV102S1A0JD36 115 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 INAFM1C9JVW0 142 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 MAGEB3O15480 346 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PSMD3O43242 534 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 SCO2O43819 266 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CYTIPO60759 359 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RHOBTB1O94844 696 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 SOX30O94993 753 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PPP1R3DO95685 299 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 BAG3O95817 575 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 WDPCPO95876 746 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RALAP11233 206 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 SFTPCP11686 197 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 POLR2CP19387 275 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 JAK1P23458 1154 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CYP2F1P24903 491 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 NR0B1P51843 470 aaKnown RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 KCNK10P57789 538 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CCZ1BP86790 482 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CCZ1P86791 482 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 EEF1A2Q05639 463 aaKnown RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RUNX1T1Q06455 604 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 DSC1Q08554 894 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 IL24Q13007 206 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PHKG1Q16816 387 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RAB6CQ53S08 254 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 OTUD1Q5VV17 481 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 UGT3A1Q6NUS8 523 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 FUT10Q6P4F1 479 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PLXDC2Q6UX71 529 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 MISPQ8IVT2 679 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 STHQ8IWL8 128 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 GBGT1Q8N5D6 347 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 BMPERQ8N8U9 685 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 OR52K2Q8NGK3 314 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 OR10T2Q8NGX3 314 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 OR5R1Q8NH85 324 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RNF128Q8TEB7 428 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 TSACCQ96A04 125 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 CCDC51Q96ER9 411 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms