RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TRIP6Q15654 476 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 AP5B1Q2VPB7 878 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 LSM12Q3MHD2 195 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 DEPDC1Q5TB30 811 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 KHDRBS2Q5VWX1 349 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ACSM2BQ68CK6 577 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 RBM44Q6ZP01 1051 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ZFAND4Q86XD8 727 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 MCATQ8IVS2 390 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 NT5CQ8TCD5 201 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 CREB3L4Q8TEY5 395 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 TM4SF19Q96DZ7 209 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 PRR11Q96HE9 360 aaPredicted RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 QRFPRQ96P65 431 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 AKTIPQ9H8T0 292 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 FANCEQ9HB96 536 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 TMEM9Q9P0T7 183 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 CCL27Q9Y4X3 112 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 PTGDR2Q9Y5Y4 395 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 H0YGG7 62 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 UBDO15205 165 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 NRP2O60462 931 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 CCDC22O60826 627 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 PEX11AO75192 247 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 PRR35P0CG20 571 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 ACPPP15309 386 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 CSRP1P21291 193 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 TSFMP43897 325 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 SEPHS1P49903 392 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 ARF3P61204 181 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 HMGCS1Q01581 520 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 ACY1Q03154 408 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 EMX2Q04743 252 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 SF3A3Q12874 501 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 ADPRMQ3LIE5 342 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 GALNTL6Q49A17 601 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 C6orf136Q5SQH8 315 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 ZNF574Q6ZN55 896 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 PAGE2Q7Z2X7 111 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 VN1R5Q7Z5H4 357 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 VN1R4Q7Z5H5 301 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 FAM9CQ8IZT9 166 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 FNDC5Q8NAU1 212 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 OR2T11Q8NH01 316 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 RGMAQ96B86 450 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 CCDC74BQ96LY2 380 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 OR52B2Q96RD2 323 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 ROGDIQ9GZN7 287 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 REXO4Q9GZR2 422 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 FAM60AQ9NP50 221 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 SIRT5Q9NXA8 310 aa15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 NOP53Q9NZM5 478 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 EIF3LQ9Y262 564 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-203ENST00000547063 A0A088AWK7 358 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 LRIT2A6NDA9 550 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 A8MU76 341 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 ZNF10P21506 573 aaPredicted RBP15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 VSX2P58304 361 aaPredicted RBP15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 SKP1P63208 163 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 ZFP36L1Q07352 338 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 TERF2Q15554 542 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 PHF19Q5T6S3 580 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 FRMPD2BQ6IN97 320 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 ADNP2Q6IQ32 1131 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 NIPAL1Q6NVV3 410 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 TRIM40Q6P9F5 258 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 ABHD13Q7L211 337 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 SLITRK4Q8IW52 837 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 CSNK1A1LQ8N752 337 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 OR2L5Q8NG80 312 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 OR8K5Q8NH50 307 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 GAL3ST3Q96A11 431 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 PHOX2BQ99453 314 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 SLC6A16Q9GZN6 736 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 OR51B5Q9H339 312 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 ASIC5Q9NY37 505 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 HEY2Q9UBP5 337 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 ADAM29Q9UKF5 820 aa15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 RUVBL1Q9Y265 456 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-203ENST00000547063 LOC105369274A0A096LPK9 316 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 LOC102723532A0A0G2JNH3 316 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 E9PBE3 544 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 KLHL41O60662 606 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 PRAMEF10O60809 474 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 EIF2S1P05198 315 aaKnown RBP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 PRPS2P11908 318 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 IDO1P14902 403 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 NCF2P19878 526 aaPredicted RBP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 CCKBRP32239 447 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 CSTF2P33240 577 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 GABRA4P48169 554 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 EMP3P54852 163 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 STX1BP61266 288 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 RPL38P63173 70 aaKnown RBP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 TUBB3Q13509 450 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 GSTA3Q16772 222 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 NDUFA9Q16795 377 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 TOR1AIP1Q5JTV8 583 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms