RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ALOX12P18054 663 aa15.05■□□□□ -0
DDX54-204ENST00000546898 ITGA3P26006 1051 aa15.05■□□□□ -0
DDX54-204ENST00000546898 SERPINB9P50453 376 aa15.05■□□□□ -0
DDX54-204ENST00000546898 SNRPNP63162 240 aaKnown RBP15.05■□□□□ -0
DDX54-204ENST00000546898 MAT1AQ00266 395 aaKnown RBP15.05■□□□□ -0
DDX54-204ENST00000546898 TLE1Q04724 770 aa15.05■□□□□ -0
DDX54-204ENST00000546898 DLG1Q12959 904 aa15.05■□□□□ -0
DDX54-204ENST00000546898 SYT16Q17RD7 645 aa15.05■□□□□ -0
DDX54-204ENST00000546898 FAM83EQ2M2I3 478 aa15.05■□□□□ -0
DDX54-204ENST00000546898 C18orf21Q32NC0 220 aaPredicted RBP15.05■□□□□ -0
DDX54-204ENST00000546898 UBAP2Q5T6F2 1119 aaKnown RBP15.05■□□□□ -0
DDX54-204ENST00000546898 IRAK1BP1Q5VVH5 260 aa15.05■□□□□ -0
DDX54-204ENST00000546898 SLCO4C1Q6ZQN7 724 aa15.05■□□□□ -0
DDX54-204ENST00000546898 ABHD13Q7L211 337 aa15.05■□□□□ -0
DDX54-204ENST00000546898 LRRC70Q7Z2Q7 622 aa15.05■□□□□ -0
DDX54-204ENST00000546898 ISCA2Q86U28 154 aa15.05■□□□□ -0
DDX54-204ENST00000546898 CENPLQ8N0S6 344 aaPredicted RBP15.05■□□□□ -0
DDX54-204ENST00000546898 TTLQ8NG68 377 aa15.05■□□□□ -0
DDX54-204ENST00000546898 RHEBL1Q8TAI7 183 aa15.05■□□□□ -0
DDX54-204ENST00000546898 SLC44A1Q8WWI5 657 aa15.05■□□□□ -0
DDX54-204ENST00000546898 SEC16BQ96JE7 1060 aa15.05■□□□□ -0
DDX54-204ENST00000546898 ATOH8Q96SQ7 321 aa15.05■□□□□ -0
DDX54-204ENST00000546898 NT5DC2Q9H857 520 aa15.05■□□□□ -0
DDX54-204ENST00000546898 IGSF5Q9NSI5 407 aa15.05■□□□□ -0
DDX54-204ENST00000546898 PTBP2Q9UKA9 531 aaKnown RBP15.05■□□□□ -0
DDX54-204ENST00000546898 NAALAD2Q9Y3Q0 740 aa15.05■□□□□ -0
DDX54-204ENST00000546898 IKBKGQ9Y6K9 419 aa15.05■□□□□ -0
DDX54-204ENST00000546898 NBASA2RRP1 2371 aa15.05■□□□□ -0
DDX54-204ENST00000546898 A0A087WUV0 522 aaPredicted RBP15.04■□□□□ -0
DDX54-204ENST00000546898 SYCE1LA8MT33 242 aa15.04■□□□□ -0
DDX54-204ENST00000546898 SGK494L7N484 410 aa15.04■□□□□ -0
DDX54-204ENST00000546898 CLGNO14967 610 aa15.04■□□□□ -0
DDX54-204ENST00000546898 RDH16O75452 317 aa15.04■□□□□ -0
DDX54-204ENST00000546898 SERPIND1P05546 499 aa15.04■□□□□ -0
DDX54-204ENST00000546898 SERPINA6P08185 405 aa15.04■□□□□ -0
DDX54-204ENST00000546898 IL10P22301 178 aa15.04■□□□□ -0
DDX54-204ENST00000546898 VARSP26640 1264 aaKnown RBP15.04■□□□□ -0
DDX54-204ENST00000546898 TYK2P29597 1187 aa15.04■□□□□ -0
DDX54-204ENST00000546898 XCR1P46094 333 aa15.04■□□□□ -0
DDX54-204ENST00000546898 HSPA7P48741 367 aa15.04■□□□□ -0
DDX54-204ENST00000546898 SLBPQ14493 270 aaKnown RBP eCLIP15.04■□□□□ -0
DDX54-204ENST00000546898 RBBP5Q15291 538 aaKnown RBP15.04■□□□□ -0
DDX54-204ENST00000546898 PDK4Q16654 411 aa15.04■□□□□ -0
DDX54-204ENST00000546898 TMEM205Q6UW68 189 aa15.04■□□□□ -0
DDX54-204ENST00000546898 LAPTM4BQ86VI4 370 aa15.04■□□□□ -0
DDX54-204ENST00000546898 PDSS2Q86YH6 399 aa15.04■□□□□ -0
DDX54-204ENST00000546898 KRT78Q8N1N4 520 aa15.04■□□□□ -0
DDX54-204ENST00000546898 ANKRD53Q8N9V6 530 aa15.04■□□□□ -0
DDX54-204ENST00000546898 OR51Q1Q8NH59 317 aa15.04■□□□□ -0
DDX54-204ENST00000546898 UBTD2Q8WUN7 234 aa15.04■□□□□ -0
DDX54-204ENST00000546898 KCTD4Q8WVF5 259 aa15.04■□□□□ -0
DDX54-204ENST00000546898 TM9SF4Q92544 642 aa15.04■□□□□ -0
DDX54-204ENST00000546898 EXT2Q93063 718 aa15.04■□□□□ -0
DDX54-204ENST00000546898 ISL2Q96A47 359 aa15.04■□□□□ -0
DDX54-204ENST00000546898 MOCOSQ96EN8 888 aa15.04■□□□□ -0
DDX54-204ENST00000546898 PAFAH2Q99487 392 aa15.04■□□□□ -0
DDX54-204ENST00000546898 SLC6A16Q9GZN6 736 aa15.04■□□□□ -0
DDX54-204ENST00000546898 ZNF552Q9H707 407 aaPredicted RBP15.04■□□□□ -0
DDX54-204ENST00000546898 CLK4Q9HAZ1 481 aaKnown RBP15.04■□□□□ -0
DDX54-204ENST00000546898 HCN3Q9P1Z3 774 aa15.04■□□□□ -0
DDX54-204ENST00000546898 MKL2Q9ULH7 1088 aa15.04■□□□□ -0
DDX54-204ENST00000546898 NFU1Q9UMS0 254 aa15.04■□□□□ -0
DDX54-204ENST00000546898 SCN2AQ99250 2005 aa15.04■□□□□ -0
DDX54-204ENST00000546898 LOC102723996A0A087X1L8 192 aa15.03■□□□□ -0
DDX54-204ENST00000546898 A0A096LPK6 155 aa15.03■□□□□ -0
DDX54-204ENST00000546898 NSG1A0A0A6YYJ2 146 aa15.03■□□□□ -0
DDX54-204ENST00000546898 SUPT3HB4E1H0 165 aa15.03■□□□□ -0
DDX54-204ENST00000546898 GALR3O60755 368 aaPredicted RBP15.03■□□□□ -0
DDX54-204ENST00000546898 ALOX12BO75342 701 aa15.03■□□□□ -0
DDX54-204ENST00000546898 SUPT3HO75486 399 aa15.03■□□□□ -0
DDX54-204ENST00000546898 KRT38O76015 456 aa15.03■□□□□ -0
DDX54-204ENST00000546898 KLHL2O95198 593 aa15.03■□□□□ -0
DDX54-204ENST00000546898 ALDOAP04075 364 aaKnown RBP15.03■□□□□ -0
DDX54-204ENST00000546898 ABHD2P08910 425 aa15.03■□□□□ -0
DDX54-204ENST00000546898 COX6A1P12074 109 aa15.03■□□□□ -0
DDX54-204ENST00000546898 CNTFP26441 200 aa15.03■□□□□ -0
DDX54-204ENST00000546898 GMPRP36959 345 aa15.03■□□□□ -0
DDX54-204ENST00000546898 IRF9Q00978 393 aa15.03■□□□□ -0
DDX54-204ENST00000546898 RAPSNQ13702 412 aa15.03■□□□□ -0
DDX54-204ENST00000546898 ACAP2Q15057 778 aa15.03■□□□□ -0
DDX54-204ENST00000546898 KLC3Q6P597 504 aa15.03■□□□□ -0
DDX54-204ENST00000546898 IGFL3Q6UXB1 125 aa15.03■□□□□ -0
DDX54-204ENST00000546898 TMIGD1Q6UXZ0 262 aa15.03■□□□□ -0
DDX54-204ENST00000546898 NDUFAF7Q7L592 441 aa15.03■□□□□ -0
DDX54-204ENST00000546898 SNX31Q8N9S9 440 aa15.03■□□□□ -0
DDX54-204ENST00000546898 C8orf44Q96CB5 159 aa15.03■□□□□ -0
DDX54-204ENST00000546898 NXNL1Q96CM4 212 aa15.03■□□□□ -0
DDX54-204ENST00000546898 WDR34Q96EX3 536 aa15.03■□□□□ -0
DDX54-204ENST00000546898 PTCD3Q96EY7 689 aaKnown RBP15.03■□□□□ -0
DDX54-204ENST00000546898 OR1F2PQ96R84 312 aa15.03■□□□□ -0
DDX54-204ENST00000546898 EFCAB11Q9BUY7 163 aa15.03■□□□□ -0
DDX54-204ENST00000546898 CD244Q9BZW8 370 aa15.03■□□□□ -0
DDX54-204ENST00000546898 TRIM4Q9C037 500 aa15.03■□□□□ -0
DDX54-204ENST00000546898 LHPPQ9H008 270 aa15.03■□□□□ -0
DDX54-204ENST00000546898 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
DDX54-204ENST00000546898 C19orf25Q9UFG5 118 aaPredicted RBP15.03■□□□□ -0
DDX54-204ENST00000546898 ZNF180Q9UJW8 692 aa15.03■□□□□ -0
DDX54-204ENST00000546898 CPAMD8Q8IZJ3 1885 aa15.03■□□□□ -0
DDX54-204ENST00000546898 CNTRLQ7Z7A1 2325 aa15.03■□□□□ -0
DDX54-204ENST00000546898 TENM4Q6N022 2769 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms