RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MYRIPQ8NFW9 859 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 ZNF483Q8TF39 744 aaPredicted RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 L3HYPDHQ96EM0 354 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 SMIM10Q96HG1 83 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 APOPT1Q96IL0 206 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 SSU72Q9NP77 194 aaKnown RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 NDOR1Q9UHB4 597 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 TCFL5Q9UL49 500 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 PLLPQ9Y342 182 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 ACTL7BQ9Y614 415 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 SPTBP11277 2137 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ANKDD1BA6NHY2 528 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 LRRC14BA6NHZ5 514 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 VSTM2BA6NLU5 285 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 OR7A17O14581 309 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 RGS16O15492 202 aaPredicted RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 CLDN9O95484 217 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 PIK3CBP42338 1070 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 AVPR1BP47901 424 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 DNAJB13P59910 316 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 SKP1P63208 163 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 GGTA1PQ4G0N0 100 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ZNF678Q5SXM1 525 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 CEP85LQ5SZL2 805 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 C10orf62Q5T681 223 aaPredicted RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ZYG11AQ6WRX3 759 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 COX15Q7KZN9 410 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ABHD13Q7L211 337 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 SRRM1Q8IYB3 904 aaKnown RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 C4orf33Q8N1A6 199 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ENDOVQ8N8Q3 282 aaKnown RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 KCT2Q8NC54 265 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 STARD8Q92502 1023 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 MOCOSQ96EN8 888 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 RNF31Q96EP0 1072 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 SMC6Q96SB8 1091 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 TGIF2Q9GZN2 237 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ACTL8Q9H568 366 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 ACTR8Q9H981 624 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 CPNE5Q9HCH3 593 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 ZBTB26Q9HCK0 441 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 GPN3Q9UHW5 284 aaPredicted RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 MID2Q9UJV3 735 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 NXT1Q9UKK6 140 aaKnown RBP13.75□□□□□ -0.21
DDX54-203ENST00000546869 PADI2Q9Y2J8 665 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 MAP4K5Q9Y4K4 846 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 PCDHGA11Q9Y5H2 935 aa13.75□□□□□ -0.21
DDX54-203ENST00000546869 SEC16AO15027 2179 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 LRIT2A6NDA9 550 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 TYROBPO43914 113 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 TBX6O95947 436 aaPredicted RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 MYL2P10916 166 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 CPA3P15088 417 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 ALOX12P18054 663 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 OR1D4P47884 311 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 ARFIP1P53367 373 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 CXADRP78310 365 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 SSPNQ14714 243 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 NKG7Q16617 165 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 UGT8Q16880 541 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 UNC50Q53HI1 259 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 MLIPQ5VWP3 458 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 MED25Q71SY5 747 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 GPR155Q7Z3F1 870 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 VN1R5Q7Z5H4 357 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX54-203ENST00000546869 AMER3Q8N944 861 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 OR7G3Q8NG95 312 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 OR2Y1Q8NGV0 311 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 UTP15Q8TED0 518 aaKnown RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 ZNF473Q8WTR7 871 aaKnown RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 COL26A1Q96A83 441 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 REPS1Q96D71 796 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 MMABQ96EY8 250 aaPredicted RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 MACROD1Q9BQ69 325 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 IQCGQ9H095 443 aaKnown RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 ANKHQ9HCJ1 492 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 OXSMQ9NWU1 459 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 ZNF282Q9UDV7 671 aaPredicted RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 PPT2Q9UMR5 302 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 STK38LQ9Y2H1 464 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 MRPS2Q9Y399 296 aaKnown RBP13.74□□□□□ -0.21
DDX54-203ENST00000546869 PKD1L2Q7Z442 2459 aa13.74□□□□□ -0.21
DDX54-203ENST00000546869 ZFHX4Q86UP3 3567 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 A0A0A6YYC8 382 aaPredicted RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 H3BQF6 201 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 I3L1I5 382 aaPredicted RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 GALR3O60755 368 aaPredicted RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 CNOT3O75175 753 aaKnown RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 OTCP00480 354 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 ITGB2P05107 769 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 CYC1P08574 325 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 IL10P22301 178 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 CCNG1P51959 295 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms